RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Stxbp4Q9WV89 557 aa17.55■□□□□ 0.4
Chd3-201ENSMUST00000092971 Nbr1P97432 988 aa17.55■□□□□ 0.4
Chd3-201ENSMUST00000092971 Dhx29Q6PGC1 1365 aaKnown RBP17.54■□□□□ 0.4
Chd3-201ENSMUST00000092971 Map3k7clP58500 142 aa17.54■□□□□ 0.4
Chd3-201ENSMUST00000092971 Iffo1Q8BXL9 562 aa17.54■□□□□ 0.4
Chd3-201ENSMUST00000092971 StambpQ9CQ26 424 aa17.54■□□□□ 0.4
Chd3-201ENSMUST00000092971 Tsg101Q61187 391 aa17.54■□□□□ 0.4
Chd3-201ENSMUST00000092971 Nop53Q8BK35 484 aaKnown RBP17.54■□□□□ 0.4
Chd3-201ENSMUST00000092971 ImmtQ8CAQ8 757 aaKnown RBP17.54■□□□□ 0.4
Chd3-201ENSMUST00000092971 Fkbp5Q64378 456 aa17.54■□□□□ 0.4
Chd3-201ENSMUST00000092971 Tacc1Q6Y685 774 aa17.54■□□□□ 0.4
Chd3-201ENSMUST00000092971 Hspa4Q61316 841 aa17.54■□□□□ 0.4
Chd3-201ENSMUST00000092971 ApobrQ8VBT6 942 aa17.54■□□□□ 0.4
Chd3-201ENSMUST00000092971 Rcan3Q9JKK0 239 aa17.53■□□□□ 0.4
Chd3-201ENSMUST00000092971 Sept6Q9R1T4 434 aa17.53■□□□□ 0.4
Chd3-201ENSMUST00000092971 Wdr33Q8K4P0 1330 aaKnown RBP17.53■□□□□ 0.4
Chd3-201ENSMUST00000092971 Wasf1Q8R5H6 559 aa17.53■□□□□ 0.4
Chd3-201ENSMUST00000092971 Cep55Q8BT07 462 aa17.53■□□□□ 0.4
Chd3-201ENSMUST00000092971 Cdk19Q8BWD8 501 aa17.53■□□□□ 0.4
Chd3-201ENSMUST00000092971 Hsf2bpQ9D4G2 338 aa17.53■□□□□ 0.4
Chd3-201ENSMUST00000092971 Hs1bp3Q3TC93 395 aa17.52■□□□□ 0.4
Chd3-201ENSMUST00000092971 Lrrfip1Q3UZ39 729 aaKnown RBP17.52■□□□□ 0.4
Chd3-201ENSMUST00000092971 Ccdc73Q8CDM4 1066 aa17.52■□□□□ 0.4
Chd3-201ENSMUST00000092971 Rbm27Q5SFM8 1060 aaKnown RBP17.52■□□□□ 0.4
Chd3-201ENSMUST00000092971 Pde4cQ3UEI1 686 aa17.52■□□□□ 0.4
Chd3-201ENSMUST00000092971 Mtmr7Q9Z2C9 660 aa17.52■□□□□ 0.39
Chd3-201ENSMUST00000092971 Rab3gap2Q8BMG7 1366 aa17.52■□□□□ 0.39
Chd3-201ENSMUST00000092971 NcapgE9PWG6 1004 aa17.51■□□□□ 0.39
Chd3-201ENSMUST00000092971 Polr3dQ91WD1 398 aa17.51■□□□□ 0.39
Chd3-201ENSMUST00000092971 Bank1Q80VH0 783 aa17.51■□□□□ 0.39
Chd3-201ENSMUST00000092971 Aplp1Q03157 653 aa17.51■□□□□ 0.39
Chd3-201ENSMUST00000092971 Hdhd2Q3UGR5 259 aa17.51■□□□□ 0.39
Chd3-201ENSMUST00000092971 Ddx10Q80Y44 875 aaKnown RBP17.51■□□□□ 0.39
Chd3-201ENSMUST00000092971 GlmnQ8BZM1 596 aa17.51■□□□□ 0.39
Chd3-201ENSMUST00000092971 Znf428Q8C1M2 176 aa17.51■□□□□ 0.39
Chd3-201ENSMUST00000092971 Fam170aQ66LM6 333 aa17.51■□□□□ 0.39
Chd3-201ENSMUST00000092971 Dnaaf4Q8R368 420 aa17.51■□□□□ 0.39
Chd3-201ENSMUST00000092971 Smtnl1Q99LM3 459 aa17.5■□□□□ 0.39
Chd3-201ENSMUST00000092971 Tmem67Q8BR76 992 aa17.5■□□□□ 0.39
Chd3-201ENSMUST00000092971 Ano2Q8CFW1 1002 aa17.5■□□□□ 0.39
Chd3-201ENSMUST00000092971 Vps18Q8R307 973 aa17.5■□□□□ 0.39
Chd3-201ENSMUST00000092971 Prpf40aQ9R1C7 953 aaKnown RBP17.5■□□□□ 0.39
Chd3-201ENSMUST00000092971 Flad1Q8R123 492 aa17.5■□□□□ 0.39
Chd3-201ENSMUST00000092971 NapbP28663 298 aa17.49■□□□□ 0.39
Chd3-201ENSMUST00000092971 SltmQ8CH25 1031 aaKnown RBP17.49■□□□□ 0.39
Chd3-201ENSMUST00000092971 Tpd52l2Q9CYZ2 220 aaKnown RBP17.49■□□□□ 0.39
Chd3-201ENSMUST00000092971 MvpQ9EQK5 861 aa17.49■□□□□ 0.39
Chd3-201ENSMUST00000092971 Zscan29E9Q5B4 869 aa17.49■□□□□ 0.39
Chd3-201ENSMUST00000092971 Ca8P28651 291 aa17.49■□□□□ 0.39
Chd3-201ENSMUST00000092971 Capn12Q9ER56 720 aa17.48■□□□□ 0.39
Chd3-201ENSMUST00000092971 Nap1l5Q9JJF0 156 aa17.48■□□□□ 0.39
Chd3-201ENSMUST00000092971 GpkowQ56A08 488 aa17.48■□□□□ 0.39
Chd3-201ENSMUST00000092971 Plekhg5Q66T02 1073 aa17.48■□□□□ 0.39
Chd3-201ENSMUST00000092971 Sdc2P43407 202 aa17.48■□□□□ 0.39
Chd3-201ENSMUST00000092971 Fermt2Q8CIB5 680 aa17.48■□□□□ 0.39
Chd3-201ENSMUST00000092971 Ankrd40Q5SUE8 363 aa17.48■□□□□ 0.39
Chd3-201ENSMUST00000092971 Ccdc66Q6NS45 935 aa17.48■□□□□ 0.39
Chd3-201ENSMUST00000092971 Erlin1Q91X78 346 aa17.48■□□□□ 0.39
Chd3-201ENSMUST00000092971 Adcy5P84309 1262 aa17.48■□□□□ 0.39
Chd3-201ENSMUST00000092971 Tshz3Q8CGV9 1081 aa17.48■□□□□ 0.39
Chd3-201ENSMUST00000092971 Trim11Q99PQ2 467 aa17.48■□□□□ 0.39
Chd3-201ENSMUST00000092971 Hvcn1Q3U2S8 269 aa17.47■□□□□ 0.39
Chd3-201ENSMUST00000092971 Nap1l2P51860 460 aa17.47■□□□□ 0.39
Chd3-201ENSMUST00000092971 Ppfibp2O35711 882 aa17.46■□□□□ 0.39
Chd3-201ENSMUST00000092971 Map4k4P97820 1233 aaKnown RBP17.46■□□□□ 0.39
Chd3-201ENSMUST00000092971 Hand2Q61039 217 aa17.46■□□□□ 0.39
Chd3-201ENSMUST00000092971 Plcd3Q8K2J0 785 aa17.46■□□□□ 0.39
Chd3-201ENSMUST00000092971 Il1rapl2Q9ERS6 686 aa17.46■□□□□ 0.39
Chd3-201ENSMUST00000092971 Ccdc12Q8R344 166 aaKnown RBP17.46■□□□□ 0.39
Chd3-201ENSMUST00000092971 Vps16Q920Q4 839 aa17.46■□□□□ 0.39
Chd3-201ENSMUST00000092971 Map3k5O35099 1380 aa17.46■□□□□ 0.39
Chd3-201ENSMUST00000092971 Cavin1O54724 392 aa17.46■□□□□ 0.38
Chd3-201ENSMUST00000092971 Neurog2P70447 263 aa17.46■□□□□ 0.38
Chd3-201ENSMUST00000092971 Pds5bQ4VA53 1446 aaKnown RBP17.45■□□□□ 0.38
Chd3-201ENSMUST00000092971 Ripk4Q9ERK0 786 aa17.45■□□□□ 0.38
Chd3-201ENSMUST00000092971 Zswim4Q8C7B8 1101 aa17.45■□□□□ 0.38
Chd3-201ENSMUST00000092971 Usp11Q99K46 921 aa17.45■□□□□ 0.38
Chd3-201ENSMUST00000092971 Nlrp3Q8R4B8 1033 aa17.45■□□□□ 0.38
Chd3-201ENSMUST00000092971 Snw1Q9CSN1 536 aaKnown RBP17.45■□□□□ 0.38
Chd3-201ENSMUST00000092971 Olr1Q9EQ09 363 aa17.45■□□□□ 0.38
Chd3-201ENSMUST00000092971 Pet2A2AHY8 747 aa17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 Mcm6P97311 821 aa17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 Cnga2Q62398 664 aa17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 Sept14Q9DA97 430 aa17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 Gng11P61953 73 aa17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 Dmrt2Q8BG36 561 aa17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 Bcar3Q9QZK2 820 aa17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 Fbln2P37889 1221 aa17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 Paxbp1P58501 919 aa17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 Skida1Q80YR3 822 aa17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 Gle1Q8R322 699 aa17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 Chmp6P0C0A3 200 aa17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 TmpoQ61033 693 aaKnown RBP17.44■□□□□ 0.38
Chd3-201ENSMUST00000092971 Atxn3Q9CVD2 355 aa17.43■□□□□ 0.38
Chd3-201ENSMUST00000092971 NsmfQ99NF2 532 aa17.43■□□□□ 0.38
Chd3-201ENSMUST00000092971 Cetn1P41209 172 aa17.43■□□□□ 0.38
Chd3-201ENSMUST00000092971 Rad23bP54728 416 aa17.43■□□□□ 0.38
Chd3-201ENSMUST00000092971 Ppp1r42Q8R1Z4 357 aa17.43■□□□□ 0.38
Chd3-201ENSMUST00000092971 Soga1E1U8D0 1418 aa17.43■□□□□ 0.38
Chd3-201ENSMUST00000092971 Pabpn1Q8CCS6 302 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 61.5 ms