RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Rimbp3Q3V0F0 1606 aa14.03□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Thsd7aQ69ZU6 1645 aa14.03□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Brd1E9PZ26 1189 aaKnown RBP14.03□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Sv2bQ8BG39 683 aa14.03□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Fam83gQ5SWY7 812 aa14.02□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Wdr17E9Q271 1322 aa14.02□□□□□ -0.17
Ddx55-201ENSMUST00000071057 GnpatP98192 678 aa14.02□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Trim27Q62158 513 aa14.02□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Gimap6Q8K349 305 aa14.02□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Ptpn23Q6PB44 1692 aa14.02□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Tet3Q8BG87 1668 aa14.01□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Fbxo2Q80UW2 297 aa14.01□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Irf6P97431 467 aa14.01□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Tmc1Q8R4P5 757 aa14.01□□□□□ -0.17
Ddx55-201ENSMUST00000071057 CarsQ9ER72 831 aaKnown RBP14.01□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Adgrb1Q3UHD1 1582 aa14.01□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Ahnak2E9PYB0 1738 aaKnown RBP14.01□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Ppp1r9bQ6R891 817 aaKnown RBP14□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Cc2d1aQ8K1A6 943 aa14□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Tbc1d32Q3URV1 1296 aa14□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Ddx17Q501J6 650 aaKnown RBP14□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Ncoa4Q5U4H9 625 aa14□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Gsdma3Q5Y4Y6 464 aa14□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Arhgap4B1AUY3 965 aa13.99□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Ccdc146E9Q9F7 977 aa13.99□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Wwc1Q5SXA9 1104 aa13.99□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Rad17Q6NXW6 688 aa13.99□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Lekr1B2RVN1 116 aa13.99□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Mmp14P53690 582 aa13.99□□□□□ -0.17
Ddx55-201ENSMUST00000071057 MpndQ3TV65 487 aa13.99□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Chpf2Q3UU43 768 aa13.99□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Tnpo1Q8BFY9 898 aaKnown RBP13.99□□□□□ -0.17
Ddx55-201ENSMUST00000071057 KnstrnQ9D9Z1 312 aaKnown RBP13.99□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Scn4aQ9ER60 1841 aa13.99□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Prkar2bP31324 416 aa13.98□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Trpm3Q5F4S9 1721 aa13.98□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Kcnh5Q920E3 988 aa13.98□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Arfgef2A2A5R2 1792 aa13.98□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Fmnl2A2APV2 1086 aa13.98□□□□□ -0.17
Ddx55-201ENSMUST00000071057 LifrP42703 1092 aa13.98□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Cyp2d12Q8BVD2 504 aa13.98□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Foxp4Q9DBY0 795 aaKnown RBP13.98□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Nfat5Q9WV30 1534 aa13.97□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Mre11Q61216 706 aa13.97□□□□□ -0.17
Ddx55-201ENSMUST00000071057 FanclQ9CR14 375 aa13.97□□□□□ -0.17
Ddx55-201ENSMUST00000071057 PtmsQ9D0J8 101 aaKnown RBP13.97□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Chmp4cQ9D7F7 232 aa13.97□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Fam13aQ8BGI4 693 aa13.96□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Dzip1Q8BMD2 852 aa13.96□□□□□ -0.17
Ddx55-201ENSMUST00000071057 WdpcpQ8C456 722 aa13.96□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Aldh1l2Q8K009 923 aa13.96□□□□□ -0.17
Ddx55-201ENSMUST00000071057 HnrnpuQ8VEK3 800 aaKnown RBP13.96□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Farp2Q91VS8 1065 aa13.96□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Wdr63B2RY71 923 aa13.96□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Sptbn5F6UCX4 1208 aa13.96□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Rabep1O35551 862 aa13.96□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Smarca5Q91ZW3 1051 aaKnown RBP13.96□□□□□ -0.17
Ddx55-201ENSMUST00000071057 Msh6P54276 1358 aaKnown RBP13.96□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Nrxn3Q6P9K9 1571 aa13.96□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Eif4g2Q62448 906 aaKnown RBP13.95□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Cetn4Q8K4K1 168 aa13.95□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Igsf1Q7TQA1 1317 aa13.95□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Tm6sf1P58749 370 aa13.94□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Amotl1Q9D4H4 968 aa13.94□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Pip4k2bQ80XI4 416 aa13.94□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Kdm6aO70546 1401 aa13.93□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Gm10471E9Q1C7 252 aa13.93□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Dixdc1Q80Y83 711 aa13.93□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Phf23Q8BSN5 401 aa13.93□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Nek4Q9Z1J2 792 aa13.93□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Unc13bQ9Z1N9 1602 aa13.93□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Dmrt2Q8BG36 561 aa13.93□□□□□ -0.18
Ddx55-201ENSMUST00000071057 GorabQ8BRM2 368 aa13.93□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Robo1O89026 1612 aa13.93□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Atf5O70191 283 aa13.92□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Zhx1P70121 873 aa13.92□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Nkx2-3P97334 362 aa13.92□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Atf3Q60765 181 aa13.92□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Arhgef1Q61210 920 aaKnown RBP13.92□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Tbc1d9Q3UYK3 1264 aa13.91□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Ppp1r37Q8BKR5 712 aa13.91□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Kif2cQ922S8 721 aa13.91□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Kcna6Q61923 529 aa13.91□□□□□ -0.18
Ddx55-201ENSMUST00000071057 AdnpQ9Z103 1108 aaKnown RBP13.91□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Bcl2l13P59017 434 aa13.9□□□□□ -0.18
Ddx55-201ENSMUST00000071057 TnrQ8BYI9 1358 aa13.9□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Fkbp4P30416 458 aa13.9□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Cgnl1Q6AW69 1298 aa13.9□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Aldh8a1Q8BH00 487 aa13.9□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Disp3A3KFU9 1347 aa13.9□□□□□ -0.18
Ddx55-201ENSMUST00000071057 Ltbp4Q8K4G1 1666 aa13.9□□□□□ -0.19
Ddx55-201ENSMUST00000071057 Btbd11Q6GQW0 1109 aa13.89□□□□□ -0.19
Ddx55-201ENSMUST00000071057 OptnQ8K3K8 584 aa13.89□□□□□ -0.19
Ddx55-201ENSMUST00000071057 Gm21698A0A087WQP8 267 aa13.89□□□□□ -0.19
Ddx55-201ENSMUST00000071057 Gm21671G3UY31 267 aa13.89□□□□□ -0.19
Ddx55-201ENSMUST00000071057 Eif4a1P60843 406 aaKnown RBP13.89□□□□□ -0.19
Ddx55-201ENSMUST00000071057 C1qtnf12Q8R2Z0 308 aa13.89□□□□□ -0.19
Ddx55-201ENSMUST00000071057 Nup153E9Q3G8 1462 aaKnown RBP13.89□□□□□ -0.19
Ddx55-201ENSMUST00000071057 Gnai2P08752 355 aaKnown RBP13.88□□□□□ -0.19
Ddx55-201ENSMUST00000071057 Srgap3Q812A2 1099 aa13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms