RNA–Protein interactions for RNA: ENSMUST00000063249.8

Xrcc1-201, Transcript of DNA repair protein XRCC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Xrcc1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1-201ENSMUST00000063249 Col1a2Q01149 1372 aa19.05■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Eif4a1P60843 406 aaKnown RBP19.05■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Anks4bQ8K3X6 423 aa19.05■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Igsf1Q7TQA1 1317 aa19.04■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Adcy9P51830 1353 aa19.04■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Rbm25B2RY56 838 aaKnown RBP19.03■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Pibf1E9Q6K3 756 aa19.03■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Hmgb2P30681 210 aaKnown RBP19.03■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Usp16Q99LG0 825 aa19.03■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 PigbQ9JJQ0 542 aa19.03■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Bicdl1A0JNT9 577 aa19.03■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Irx6Q9ER75 438 aa19.03■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Ric1Q69ZJ7 1422 aa19.02■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Cyp2d12Q8BVD2 504 aa19.02■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 OscarQ8VBT3 265 aa19.02■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Iqsec3Q3TES0 1195 aa19.01■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Gas2l2Q5SSG4 860 aa19.01■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Kndc1Q0KK55 1742 aa19.01■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 1700019A02RikA0A087WPV9 146 aa19■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 NudcO35685 332 aaKnown RBP19■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Ksr2Q3UVC0 959 aa19■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 TefQ9JLC6 301 aa19■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Nav1Q8CH77 1875 aa19■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Pde4dQ01063 747 aa18.99■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 CoblQ5NBX1 1337 aaKnown RBP18.99■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Chpf2Q3UU43 768 aa18.99■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Tnnt1O88346 262 aa18.98■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Cnnm1Q0GA42 951 aa18.98■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Atf5O70191 283 aa18.98■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Mylk2Q8VCR8 613 aa18.98■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Msh6P54276 1358 aaKnown RBP18.97■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 CenpbP27790 599 aa18.97■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Flad1Q8R123 492 aa18.97■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 GckrQ91X44 587 aa18.97■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Taf7Q9R1C0 341 aa18.97■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Q3TQI7 289 aaKnown RBP18.96■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Pdia6Q922R8 440 aaKnown RBP18.96■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Dlg5E9Q9R9 1921 aa18.96■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Smarcc1P97496 1104 aa18.96■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Miga2Q8BK03 593 aa18.96■□□□□ 0.63
Xrcc1-201ENSMUST00000063249 Syde2E9PUP1 1314 aa18.95■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 CastP51125 788 aa18.95■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Cers3Q1A3B0 383 aa18.95■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Gm13023A2A8N2 498 aa18.95■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Fkbp4P30416 458 aa18.95■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Ezh2Q61188 746 aaKnown RBP18.95■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Prkab2Q6PAM0 271 aa18.94■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 DiexfQ8BTT6 772 aaKnown RBP18.93■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Ccar1Q8CH18 1146 aaKnown RBP18.93■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Tmem119Q8R138 280 aa18.93■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Bcl2l13P59017 434 aa18.93■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Fam198bQ3UPI1 517 aa18.93■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Gm12185Q5NCB2 835 aa18.92■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Clcn1Q64347 994 aa18.92■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Vamp4O70480 141 aa18.91■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 MetP16056 1379 aa18.91■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 PsapQ61207 557 aaKnown RBP18.91■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 VirmaA2AIV2 1811 aaKnown RBP18.9■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 Col4a1P02463 1669 aa18.9■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 SympkQ80X82 1284 aa18.89■□□□□ 0.62
Xrcc1-201ENSMUST00000063249 C4bP01029 1738 aa18.89■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Kank1E9Q238 1360 aa18.89■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Trim26Q99PN3 545 aa18.89■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 MeiocA2AG06 965 aa18.88■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Kif23E9Q5G3 953 aa18.88■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Zbtb1Q91VL9 713 aa18.88■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Akt1s1Q9D1F4 257 aa18.88■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Kdm2bQ6P1G2 1309 aa18.87■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 BcorQ8CGN4 1759 aa18.87■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Gm6268A2A3U9 297 aa18.87■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Nip7Q9CXK8 180 aaKnown RBP18.87■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Slc39a6Q8C145 765 aa18.86■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Gigyf1Q99MR1 1044 aaKnown RBP18.86■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Erbb4Q61527 1308 aa18.86■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Morc2aQ69ZX6 1030 aa18.86■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 KarsQ99MN1 595 aaKnown RBP18.86■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Lrrc43Q3V0L5 667 aa18.85■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Ccdc60Q8C4J0 545 aa18.85■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Ccdc171E9Q1U1 1324 aa18.85■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Plekhh1Q80TI1 1356 aa18.85■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Cnksr1A2A9K7 700 aa18.84■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 NppbP40753 121 aa18.84■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Polr3glQ8R0C0 218 aa18.84■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Ccdc85cE9Q6B2 420 aa18.83■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Chl1P70232 1209 aa18.83■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Slfnl1Q8BHW9 410 aa18.83■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Trim52Q8CDV4 233 aa18.83■□□□□ 0.61
Xrcc1-201ENSMUST00000063249 Spata31d1bE9QA57 1361 aa18.83■□□□□ 0.6
Xrcc1-201ENSMUST00000063249 Ildr2B5TVM2 661 aa18.83■□□□□ 0.6
Xrcc1-201ENSMUST00000063249 RtcbQ99LF4 505 aaKnown RBP18.82■□□□□ 0.6
Xrcc1-201ENSMUST00000063249 Zfyve9A2A8R0 1397 aa18.82■□□□□ 0.6
Xrcc1-201ENSMUST00000063249 Jdp2P97875 163 aa18.81■□□□□ 0.6
Xrcc1-201ENSMUST00000063249 Ubr3Q5U430 1889 aa18.81■□□□□ 0.6
Xrcc1-201ENSMUST00000063249 Igfbp6P47880 238 aa18.81■□□□□ 0.6
Xrcc1-201ENSMUST00000063249 Rapgef4Q9EQZ6 1011 aa18.81■□□□□ 0.6
Xrcc1-201ENSMUST00000063249 Prr29B1ARI9 187 aa18.8■□□□□ 0.6
Xrcc1-201ENSMUST00000063249 G3bp1P97855 465 aaKnown RBP18.8■□□□□ 0.6
Xrcc1-201ENSMUST00000063249 CoilQ5SU73 570 aa18.8■□□□□ 0.6
Xrcc1-201ENSMUST00000063249 Cavin2Q63918 418 aaKnown RBP18.79■□□□□ 0.6
Xrcc1-201ENSMUST00000063249 HmcesQ8R1M0 353 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms