RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 DonsonQ9QXP4 560 aa18.11■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Ccdc6D3YZP9 469 aa18.1■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Naa15Q80UM3 865 aaKnown RBP18.1■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Tex13c2A0A0G2JGA3 530 aa18.1■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Cep120Q7TSG1 988 aa18.1■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Puf60Q3UEB3 564 aaKnown RBP18.1■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Trerf1Q8BXJ2 1205 aa18.1■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Ccdc12Q8R344 166 aaKnown RBP18.1■□□□□ 0.49
Ubr3-201ENSMUST00000055758 MvpQ9EQK5 861 aa18.1■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Ccdc174Q3U155 467 aa18.1■□□□□ 0.49
Ubr3-201ENSMUST00000055758 FanciQ8K368 1330 aa18.1■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Mmel1Q9JLI3 765 aa18.09■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Gng11P61953 73 aa18.09■□□□□ 0.49
Ubr3-201ENSMUST00000055758 NmiO35309 314 aa18.09■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Psmc4P54775 418 aa18.09■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Ccdc66Q6NS45 935 aa18.09■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Trim11Q99PQ2 467 aa18.09■□□□□ 0.49
Ubr3-201ENSMUST00000055758 PsapQ61207 557 aaKnown RBP18.09■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Nop53Q8BK35 484 aaKnown RBP18.09■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Rbm19Q8R3C6 952 aaKnown RBP18.09■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Atp2b1G5E829 1220 aa18.08■□□□□ 0.49
Ubr3-201ENSMUST00000055758 CebpzP53569 1052 aaKnown RBP18.08■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Tsg101Q61187 391 aa18.08■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Ccdc172Q810N9 267 aa18.08■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Ccdc178Q8CDV0 866 aa18.08■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Sirt1Q923E4 737 aa18.08■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Cdc37l1Q9CZP7 335 aa18.08■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.08■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Rasa1E9PYG6 1038 aa18.08■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Znf653Q6YND2 615 aa18.08■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Skida1Q80YR3 822 aa18.08■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Ctnna2Q61301 953 aa18.08■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Stx1aO35526 288 aa18.07■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Dact3Q0PHV7 610 aa18.07■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Zfp42P22227 288 aa18.07■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Gsdma2Q32M21 443 aa18.07■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Ctage5Q8R311 779 aa18.07■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Hsf2bpQ9D4G2 338 aa18.07■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Cc2d2bA0A286YDU8 1405 aa18.07■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Suds3Q8BR65 328 aa18.07■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Cep55Q8BT07 462 aa18.07■□□□□ 0.48
Ubr3-201ENSMUST00000055758 MycnP03966 462 aaKnown RBP18.07■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Tnni2P13412 182 aa18.07■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Q9D9H8 365 aa18.07■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Cers3Q1A3B0 383 aa18.06■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Arl1P61211 181 aa18.06■□□□□ 0.48
Ubr3-201ENSMUST00000055758 AidaQ8C4Q6 305 aa18.06■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Carmil1Q6EDY6 1374 aa18.06■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Apbb1ipQ8R5A3 670 aa18.06■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Tex35Q14BK3 207 aa18.06■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Kiaa1211Q5PR69 1207 aa18.06■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Sh3d21Q7TSG5 549 aa18.06■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Zswim4Q8C7B8 1101 aa18.06■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Cct2P80314 535 aaKnown RBP18.05■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Cux1P53564 1515 aa18.05■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Zfp644E9QA22 1323 aa18.05■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Cfap69Q8BH53 942 aa18.05■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Gbp8Q2V6D6 525 aa18.05■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Morc4Q8BMD7 928 aa18.05■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Ano2Q8CFW1 1002 aa18.05■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Kdm5dQ62240 1548 aa18.04■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Trim34bJ3QNR8 485 aa18.04■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Smco2Q9DA21 347 aa18.04■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Hook3Q8BUK6 718 aa18.04■□□□□ 0.48
Ubr3-201ENSMUST00000055758 ImmtQ8CAQ8 757 aaKnown RBP18.04■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Tdrd9Q14BI7 1383 aa18.04■□□□□ 0.48
Ubr3-201ENSMUST00000055758 DesP31001 469 aaKnown RBP18.04■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Fez2Q6TYB5 348 aa18.04■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Bag4Q8CI61 457 aa18.04■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Zkscan7E9PVW1 718 aa18.04■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Tmem132aQ922P8 1018 aa18.04■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Zbtb21E9Q444 1094 aa18.03■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Vps37dQ810I0 261 aa18.03■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Ddx10Q80Y44 875 aaKnown RBP18.03■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Slc26a8Q8R0C3 999 aa18.03■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Sept14Q9DA97 430 aa18.03■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Zscan29E9Q5B4 869 aa18.03■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Gbp1Q01514 589 aa18.03■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Brms1Q99N20 246 aa18.03■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Ktn1Q61595 1327 aaKnown RBP18.03■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Specc1Q5SXY1 1067 aa18.03■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Naa25Q8BWZ3 972 aa18.03■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Rrs1Q9CYH6 365 aaKnown RBP18.02■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Nap1l5Q9JJF0 156 aa18.02■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Sdc2P43407 202 aa18.02■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Cep63Q3UPP8 700 aa18.02■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Cacna2d4Q5RJF7 1116 aa18.02■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Igf2bp2Q5SF07 592 aaKnown RBP18.02■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Akap8Q9DBR0 687 aaKnown RBP18.02■□□□□ 0.48
Ubr3-201ENSMUST00000055758 ScribQ80U72 1612 aa18.02■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Rnf216P58283 853 aa18.02■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Mapk8ip1Q9WVI9 707 aa18.02■□□□□ 0.48
Ubr3-201ENSMUST00000055758 Ccdc42Q5SV66 316 aa18.02■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Mxra7Q9CZH7 178 aa18.02■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Specc1lQ2KN98 1118 aaKnown RBP18.02■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ltv1Q6NSQ7 470 aaKnown RBP18.01■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Tacc3Q9JJ11 631 aa18.01■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Klhl10Q9D5V2 608 aa18.01■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Map7d1A2AJI0 846 aa18.01■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Nucb2P81117 420 aa18.01■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms