RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Smg7Q5RJH6 1138 aaKnown RBP12.85□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Gys2Q8VCB3 704 aa12.85□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Tacc1Q6Y685 774 aa12.85□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Lmbr1Q9JIT0 490 aa12.85□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Ccdc178Q8CDV0 866 aa12.85□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Gbp7Q91Z40 638 aa12.85□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Puf60Q3UEB3 564 aaKnown RBP12.84□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Gigyf2Q6Y7W8 1291 aaKnown RBP12.84□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Rapgef2Q8CHG7 1496 aa12.84□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Rbm19Q8R3C6 952 aaKnown RBP12.84□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Ddx27Q921N6 760 aaKnown RBP12.84□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Gbp2Q9Z0E6 589 aa12.84□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Shtn1Q8K2Q9 631 aa12.84□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Hsf2bpQ9D4G2 338 aa12.84□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Zkscan7E9PVW1 718 aa12.83□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Capza3P70190 299 aa12.83□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Chd1lQ9CXF7 900 aa12.83□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Rrs1Q9CYH6 365 aaKnown RBP12.83□□□□□ -0.35
Gtf3c1-201ENSMUST00000055506 Cep131Q62036 1060 aa12.83□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 U2af2P26369 475 aaKnown RBP12.83□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Specc1Q5SXY1 1067 aa12.83□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Zpr1Q62384 459 aa12.83□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 StambpQ9CQ26 424 aa12.83□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 TefQ9JLC6 301 aa12.83□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Brd1E9PZ26 1189 aaKnown RBP12.83□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 1700122O11RikJ3QPW6 241 aa12.83□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 LarsQ8BMJ2 1178 aa12.83□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Hook3Q8BUK6 718 aa12.83□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 TatQ8QZR1 454 aa12.83□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Ctnna2Q61301 953 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Ccdc94Q9D6J3 314 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Sdc2P43407 202 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Nop53Q8BK35 484 aaKnown RBP12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Apbb1ipQ8R5A3 670 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Prpf40aQ9R1C7 953 aaKnown RBP12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Zfp42P22227 288 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 EvcP57680 1005 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Cdkl5Q3UTQ8 938 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Mrps25Q9D125 171 aaKnown RBP12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Ercc6lQ8BHK9 1240 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Bcar3Q9QZK2 820 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Phldb1Q6PDH0 1371 aaKnown RBP12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Gm3409A0A0G2JE67 319 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Plekhd1B2RPU2 505 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Eftud2O08810 971 aaKnown RBP12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Rnf216P58283 853 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Abcf1Q6P542 837 aaKnown RBP12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Cdc37l1Q9CZP7 335 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Polr3dQ91WD1 398 aa12.82□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Slc26a8Q8R0C3 999 aa12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Ppfibp1Q8C8U0 969 aaKnown RBP12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Q9D9H8 365 aa12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Terf2O35144 541 aa12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Eif3j1Q3UGC7 261 aaKnown RBP12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Eif3j2Q66JS6 263 aa12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Fam170aQ66LM6 333 aa12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Sh3d21Q7TSG5 549 aa12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Vps16Q920Q4 839 aa12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Lztfl1Q9JHQ5 299 aa12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Snx13Q6PHS6 957 aa12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Pdcl2Q78Y63 240 aa12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Krt84Q99M73 603 aa12.81□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Stx1aO35526 288 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Igf2bp2Q5SF07 592 aaKnown RBP12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Ccdc42Q5SV66 316 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Cplx4Q80WM3 160 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Mxra7Q9CZH7 178 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Cfap73J3QPZ5 306 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Tubb6Q922F4 447 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Eef1dP57776 281 aaKnown RBP12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Specc1lQ2KN98 1118 aaKnown RBP12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Ccdc148Q6P5U8 527 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Sparcl1P70663 650 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Naa15Q80UM3 865 aaKnown RBP12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Fam76aQ922G2 307 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 MvpQ9EQK5 861 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Gucy1a3Q9ERL9 691 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Rab3gap2Q8BMG7 1366 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 ChkbO55229 394 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Usp25P57080 1055 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Ttll12Q3UDE2 639 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Ddx46Q569Z5 1032 aaKnown RBP12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Syt10Q9R0N4 523 aa12.8□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Tex35Q14BK3 207 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Rassf4Q8CB96 322 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Cetn2Q9R1K9 172 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Tsr2Q8C8T8 191 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 VeztQ3ZK22 780 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Dhx29Q6PGC1 1365 aaKnown RBP12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Psmb7P70195 277 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 SfswapQ3USH5 945 aaKnown RBP12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Cep55Q8BT07 462 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Ccdc186Q8C9S4 917 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Stard3nlQ9DCI3 235 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Stx6Q9JKK1 255 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 UacaQ8CGB3 1411 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Cyp4f39Q8BGU0 532 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Sec62Q8BU14 398 aaKnown RBP12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Cfap53Q9D439 514 aa12.79□□□□□ -0.36
Gtf3c1-201ENSMUST00000055506 Kiaa1328Q6NZK5 612 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms