RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Fam13bQ8K2H3 851 aa20.55■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Spg7Q3ULF4 781 aa20.55■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Tmem67Q8BR76 992 aa20.55■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 OvosQ3UU35 1456 aa20.55■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Gjb2Q00977 226 aa20.55■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Ifit1bl2Q3U687 466 aa20.55■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Tspyl2Q7TQI8 677 aa20.54■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Myd88P22366 296 aa20.54■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Plekhm2Q80TQ5 1018 aa20.54■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 TimelessQ9R1X4 1197 aa20.54■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Pafah1b1P63005 410 aaKnown RBP20.54■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Irf9Q61179 399 aa20.54■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 PtprkP35822 1457 aa20.54■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Crocc2F6XLV1 1638 aa20.54■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Ssh1Q76I79 1042 aa20.53■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 ScaperF8VQ70 1398 aaKnown RBP20.53■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 ZwintQ9CQU5 252 aa20.53■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Atxn3Q9CVD2 355 aa20.53■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Olr1Q9EQ09 363 aa20.53■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Caskin1Q6P9K8 1431 aa20.53■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Slu7Q8BHJ9 585 aa20.52■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Fez1Q8K0X8 392 aa20.52■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 Cul5Q9D5V5 780 aa20.52■□□□□ 0.88
Pcdhac2-201ENSMUST00000047479 CastP51125 788 aa20.52■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Slc12a5Q91V14 1138 aa20.52■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 NsmfQ99NF2 532 aa20.52■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Idi2Q8BFZ6 227 aa20.51■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Trim11Q99PQ2 467 aa20.51■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 IncenpQ9WU62 880 aa20.51■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Map9Q3TRR0 646 aa20.51■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Znf18Q810A1 556 aa20.51■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 GptQ8QZR5 496 aa20.51■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Knop1Q9Z2Q2 478 aaKnown RBP20.51■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Ppm1eQ80TL0 749 aa20.5■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Rnf41Q8BH75 317 aa20.5■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Trim30cD3YVI9 513 aa20.5■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Wwc1Q5SXA9 1104 aa20.5■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Cacna2d4Q5RJF7 1116 aa20.5■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Rbm27Q5SFM8 1060 aaKnown RBP20.49■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Frmd3Q8BHD4 595 aa20.49■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Cdan1Q8CC12 1239 aa20.49■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Tsg101Q61187 391 aa20.49■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Slc14a2Q8R4T9 930 aa20.49■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Traf3ip1Q149C2 625 aa20.48■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Hs1bp3Q3TC93 395 aa20.48■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Cyp7a1Q64505 503 aa20.48■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Txndc16Q7TN22 820 aa20.48■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Ces1aE9PYP1 563 aa20.48■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Rad23bP54728 416 aa20.48■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Gnat3Q3V3I2 354 aa20.48■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Map3k2Q61083 619 aa20.48■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Znf131Q8K3J5 619 aa20.48■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Ppp1r21Q3TDD9 780 aa20.48■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Chpf2Q3UU43 768 aa20.48■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Tmem87bQ8BKU8 555 aa20.48■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 TxlnaQ6PAM1 554 aaKnown RBP20.47■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Ccdc181Q80ZU5 509 aa20.47■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Abcc5Q9R1X5 1436 aa20.47■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Gbp4Q61107 620 aa20.47■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Cc2d1bQ8BRN9 848 aa20.47■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Brms1Q99N20 246 aa20.47■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Znf697Q569E7 569 aa20.47■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Rnf216P58283 853 aa20.46■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Def6Q8C2K1 630 aa20.46■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 NinlQ6ZQ12 1394 aa20.46■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Syce3B5KM66 88 aa20.46■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Il1rapl2Q9ERS6 686 aa20.46■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Wdr33Q8K4P0 1330 aaKnown RBP20.46■□□□□ 0.87
Pcdhac2-201ENSMUST00000047479 Cetn2Q9R1K9 172 aa20.45■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Cwc25Q9DBF7 416 aa20.45■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Sh3d21Q7TSG5 549 aa20.45■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Fam184aE9PW83 1143 aa20.45■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Rbm10Q99KG3 930 aaKnown RBP20.45■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Aplp1Q03157 653 aa20.45■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Q9D5Q8 446 aa20.45■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Pet2A2AHY8 747 aa20.44■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 ParvgQ9ERD8 331 aa20.44■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Mcm10Q0VBD2 885 aa20.44■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Matr3Q8K310 846 aaKnown RBP20.44■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Ankle2Q6P1H6 964 aa20.44■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Bcar3Q9QZK2 820 aa20.44■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Naip2Q9QUK4 1447 aa20.44■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Izumo3A6PWV3 263 aa20.43■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Smarcc1P97496 1104 aa20.43■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Ankrd13dQ6PD24 605 aa20.43■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Dzip1Q8BMD2 852 aa20.43■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 RarsQ9D0I9 660 aaKnown RBP20.43■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Fbf1A2A870 1173 aa20.43■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Speer4dL7N216 212 aa20.43■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Cct2P80314 535 aaKnown RBP20.43■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Nfxl1E9Q8I7 918 aaKnown RBP20.42■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Tom1O88746 492 aa20.42■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Q3UPC7 1272 aa20.42■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Frat2Q8K025 231 aa20.42■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Cetn1P41209 172 aa20.42■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Ift74Q8BKE9 600 aa20.42■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Ccdc150Q8CDI7 1110 aa20.42■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Pik3r4Q8VD65 1358 aa20.42■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Dnaaf4Q8R368 420 aa20.42■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Nip7Q9CXK8 180 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms