RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Slx4ipQ9D7Y9 413 aa21.66■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Mlh1Q9JK91 760 aa21.66■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Mmp8O70138 465 aa21.66■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Pank2Q3U4S0 443 aa21.66■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Frmpd2A0A140LI67 1392 aa21.65■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Ythdc1E9Q5K9 736 aaKnown RBP21.65■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Pa2g4P50580 394 aaKnown RBP21.65■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Kif20aP97329 887 aa21.65■■□□□ 1.06
Ptpra-201ENSMUST00000028769 MccE9PWI3 1003 aa21.64■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Hoxc9P09633 260 aa21.64■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Cyp2d11P24457 504 aa21.64■■□□□ 1.05
Ptpra-201ENSMUST00000028769 EspnlQ3UYR4 1005 aa21.64■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Mum1Q6DID5 682 aa21.64■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Edc3Q8K2D3 508 aaKnown RBP21.64■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Atp8b2P98199 1209 aa21.63■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Zbtb22Q9Z0G7 638 aa21.63■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Parp14Q2EMV9 1817 aa21.63■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Tceanc2Q8R2M0 207 aa21.62■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Disp3A3KFU9 1347 aa21.62■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Kif20bQ80WE4 1774 aaKnown RBP21.62■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Znf541Q0GGX2 1363 aa21.62■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Ncapd2Q8K2Z4 1392 aa21.62■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Rrp12Q6P5B0 1295 aaKnown RBP21.62■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Ccdc155Q80VJ8 648 aa21.62■■□□□ 1.05
Ptpra-201ENSMUST00000028769 4930407I10RikD3Z5T8 1512 aa21.61■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Pmfbp1Q9WVQ0 1022 aa21.61■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Itsn1Q9Z0R4 1714 aa21.61■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Dhx16G3X8X0 1044 aaKnown RBP21.61■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Bach1P97302 739 aa21.61■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Elp1Q7TT37 1333 aaKnown RBP21.6■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Nwd1A6H603 1563 aa21.6■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Astn2Q80Z10 1352 aa21.6■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Mdc1Q5PSV9 1707 aa21.6■■□□□ 1.05
Ptpra-201ENSMUST00000028769 St18Q80TY4 1045 aa21.59■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Nol11Q8BJW5 723 aaKnown RBP21.59■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Phf23Q8BSN5 401 aa21.59■■□□□ 1.05
Ptpra-201ENSMUST00000028769 TatQ8QZR1 454 aa21.59■■□□□ 1.05
Ptpra-201ENSMUST00000028769 PzpQ61838 1495 aa21.59■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Usp48Q3V0C5 1052 aa21.59■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Brf1Q8CFK2 676 aa21.59■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Foxp4Q9DBY0 795 aaKnown RBP21.59■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Tceal9Q9DD24 104 aa21.58■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Gemin5Q8BX17 1502 aaKnown RBP21.58■■□□□ 1.05
Ptpra-201ENSMUST00000028769 Mcmdc2E9Q956 681 aa21.58■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Gripap1Q8VD04 806 aa21.58■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Unc5clQ6R653 518 aa21.57■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Pdzrn3Q69ZS0 1063 aa21.57■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Mrps27Q8BK72 415 aaKnown RBP21.57■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Vwa3bJ9JI28 736 aa21.56■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Ier5O89113 308 aa21.56■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Pdia4P08003 638 aaKnown RBP21.56■■□□□ 1.04
Ptpra-201ENSMUST00000028769 ImpactO55091 318 aa21.55■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Rrp9Q91WM3 475 aaKnown RBP21.55■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Nkx2-3P97334 362 aa21.55■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Tgfb1i1Q62219 461 aa21.55■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Ppfia3P60469 1194 aa21.55■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Mad1l1Q9WTX8 717 aaKnown RBP21.55■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Pik3c2bE9QAN8 1632 aa21.54■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Hspa2P17156 633 aa21.54■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Btbd11Q6GQW0 1109 aa21.54■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Bms1Q6PGF5 1284 aaKnown RBP21.54■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Usp32F8VPZ3 1604 aa21.54■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Gm45015A0A140LII9 184 aa21.54■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Gm18336A0A140LIU8 765 aa21.54■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Gjb2Q00977 226 aa21.54■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Chd1lQ9CXF7 900 aa21.54■■□□□ 1.04
Ptpra-201ENSMUST00000028769 LlphQ9D945 130 aaKnown RBP21.54■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Spef2Q8C9J3 1734 aa21.53■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Ets1P27577 440 aa21.53■■□□□ 1.04
Ptpra-201ENSMUST00000028769 CgnP59242 1191 aa21.53■■□□□ 1.04
Ptpra-201ENSMUST00000028769 IbspQ61711 324 aa21.53■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Kif4P33174 1231 aa21.53■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Dip2bQ3UH60 1574 aa21.52■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Fyb1O35601 819 aa21.52■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Casc1Q6TDU8 730 aa21.52■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Samm50Q8BGH2 469 aa21.52■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Dnajc10Q9DC23 793 aa21.52■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Mcm3P25206 812 aaKnown RBP21.52■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Isy1Q69ZQ2 285 aaKnown RBP21.52■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Il1rapl2Q9ERS6 686 aa21.52■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Rcan3Q9JKK0 239 aa21.52■■□□□ 1.04
Ptpra-201ENSMUST00000028769 Olfml1Q8BSH2 233 aa21.51■■□□□ 1.03
Ptpra-201ENSMUST00000028769 AnlnQ8K298 1121 aaKnown RBP21.51■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Map3k2Q61083 619 aa21.51■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Ddrgk1Q80WW9 315 aa21.51■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Polr3gQ6NXY9 223 aa21.5■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Gm10471E9Q1C7 252 aa21.5■■□□□ 1.03
Ptpra-201ENSMUST00000028769 FosbP13346 338 aa21.5■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Erbb4Q61527 1308 aa21.49■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Zscan25B2RX31 543 aa21.49■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Atf5O70191 283 aa21.49■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Tsr2Q8C8T8 191 aa21.49■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Elmsan1E9Q2I4 1089 aaKnown RBP21.48■■□□□ 1.03
Ptpra-201ENSMUST00000028769 KinQ8K339 391 aa21.48■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Dip2aQ8BWT5 1523 aa21.48■■□□□ 1.03
Ptpra-201ENSMUST00000028769 VgfQ0VGU4 617 aa21.47■■□□□ 1.03
Ptpra-201ENSMUST00000028769 4930504O13RikQ8C5Z9 145 aa21.47■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Cdca7lQ922M5 438 aa21.47■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Smc3Q9CW03 1217 aaKnown RBP21.47■■□□□ 1.03
Ptpra-201ENSMUST00000028769 Eif4a1P60843 406 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms