RNA–Protein interactions for RNA: ENSMUST00000028003.8

Lmx1a-201, Transcript of LIM homeobox transcription factor 1-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lmx1a, Length 3,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1a-201ENSMUST00000028003 Cdhr2E9Q7P9 1308 aa10.44□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Rbm27Q5SFM8 1060 aaKnown RBP10.44□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Dixdc1Q80Y83 711 aa10.44□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Bag4Q8CI61 457 aa10.44□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Zscan25B2RX31 543 aa10.43□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Dync1i1O88485 628 aa10.43□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Ptgs1P22437 602 aa10.43□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Ttc41Q692V3 1318 aa10.43□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Casq1O09165 405 aa10.43□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Ccdc30Q8BVF4 654 aa10.43□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Rlbp1Q9Z275 317 aa10.43□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Map3k19E9Q3S4 1311 aa10.43□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Nid2O88322 1403 aa10.43□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Ddx17Q501J6 650 aaKnown RBP10.43□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Zranb1Q7M760 708 aa10.43□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Ccdc96Q9CR92 584 aa10.43□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Brpf1B2RRD7 1212 aa10.42□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Rbm42Q91V81 474 aaKnown RBP10.42□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Syce3B5KM66 88 aa10.42□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 NmiO35309 314 aa10.42□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 ImpactO55091 318 aa10.42□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Glipr1l2Q9CQ35 332 aa10.42□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Gm973E9Q295 1059 aa10.41□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 GorabQ8BRM2 368 aa10.41□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Gripap1Q8VD04 806 aa10.41□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Atl3Q91YH5 541 aa10.41□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Irx4Q9QY61 515 aa10.41□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Sparcl1P70663 650 aa10.41□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Trim58Q5NCC9 485 aa10.41□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Slx1bQ8BX32 270 aa10.41□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Astn2Q80Z10 1352 aa10.41□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Pnmal2G3X9N3 661 aa10.41□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Ncbp1Q3UYV9 790 aaKnown RBP10.41□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Taf3Q5HZG4 932 aa10.4□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Anp32cQ64G17 123 aa10.4□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Bloc1s4Q8VED2 215 aa10.4□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Nlrp6Q91WS2 869 aa10.4□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Exosc9Q9JHI7 438 aaKnown RBP10.4□□□□□ -0.74
Lmx1a-201ENSMUST00000028003 Frmpd2A0A140LI67 1392 aa10.4□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Duxf3A0A0N4SV92 674 aa10.4□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 PtmsQ9D0J8 101 aaKnown RBP10.4□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Zeb2Q9R0G7 1215 aa10.4□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Pard3Q99NH2 1333 aa10.39□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Phf23Q8BSN5 401 aa10.39□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 CemipQ8BI06 1361 aa10.39□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 PaskQ8CEE6 1383 aa10.39□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Ccdc173A0JLY1 547 aa10.39□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Ica1lQ3TY65 431 aa10.38□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Kcnh5Q920E3 988 aa10.38□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Dmrtc1Q9D9R7 182 aa10.38□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 KnstrnQ9D9Z1 312 aaKnown RBP10.38□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Phlpp2Q8BXA7 1320 aa10.38□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Rad17Q6NXW6 688 aa10.38□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Tnrc6cQ3UHC0 1690 aaKnown RBP10.38□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Rasa1E9PYG6 1038 aa10.38□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Dnajc2P54103 621 aaKnown RBP10.38□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Olfml1Q8BSH2 233 aa10.38□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Nol7Q9D7Z3 254 aaKnown RBP10.38□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Mctp2Q5RJH2 878 aa10.37□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Ddx54Q8K4L0 874 aaKnown RBP10.37□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Kif2cQ922S8 721 aa10.37□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Inpp5dQ9ES52 1191 aa10.37□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Kif4P33174 1231 aa10.37□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Ano8Q6PB70 1060 aa10.37□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Cdk12Q14AX6 1484 aaKnown RBP10.37□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Cacna1sQ02789 1880 aa10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Dzip1Q8BMD2 852 aa10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Kdm4aQ8BW72 1064 aa10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Kat6bQ8BRB7 1872 aa10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 MycnP03966 462 aaKnown RBP10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Hvcn1Q3U2S8 269 aa10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Slc35g1Q8BY79 368 aa10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Chd1lQ9CXF7 900 aa10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Tfip11Q9ERA6 838 aaKnown RBP10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Gm10093D3YYI8 482 aa10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Hdac1O09106 482 aaKnown RBP10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Cdkn1cP49919 348 aa10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Tbc1d31Q6NXY1 996 aa10.36□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Card10P58660 1021 aa10.35□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Nxf2Q4ZGD8 691 aa10.35□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Chrm1P12657 460 aa10.35□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Vps33bP59016 617 aa10.35□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Irx2P81066 474 aa10.35□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Fam177a1Q8BR63 207 aa10.35□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Smim5Q8BT42 78 aa10.35□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Nfatc2ipO09130 412 aa10.35□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Tpd52l1O54818 204 aa10.35□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Trap1aP19473 224 aa10.35□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Pm20d1Q8C165 503 aa10.35□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Cog6Q8R3I3 657 aa10.35□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Bach2P97303 839 aa10.34□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Casc1Q6TDU8 730 aa10.34□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Kif18aQ91WD7 886 aa10.34□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Scn7aB1AYL1 1681 aa10.34□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Ly75Q60767 1723 aa10.34□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Uhrf1bp1lA2RSJ4 1457 aa10.34□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Capn2O08529 700 aa10.34□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Zkscan1Q8BGS3 561 aaKnown RBP10.34□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Nwd2Q6P5U7 1742 aa10.34□□□□□ -0.75
Lmx1a-201ENSMUST00000028003 Robo1O89026 1612 aa10.33□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms