RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Atg4aQ8C9S8 396 aa14.83□□□□□ -0.03
Trim23-201ENSMUST00000022225 Nop14Q8R3N1 860 aaKnown RBP14.83□□□□□ -0.03
Trim23-201ENSMUST00000022225 Add3Q9QYB5 706 aaKnown RBP14.83□□□□□ -0.03
Trim23-201ENSMUST00000022225 Cfap65Q3V0B4 1847 aa14.83□□□□□ -0.03
Trim23-201ENSMUST00000022225 Stag3O70576 1240 aa14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Mcm3P25206 812 aaKnown RBP14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Rab11fip3Q8CHD8 1047 aa14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Sytl4Q9R0Q1 673 aa14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Xrn1P97789 1719 aaKnown RBP14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Ttc21bQ0HA38 1315 aa14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Kansl3A2RSY1 903 aaKnown RBP14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Zfp597E9Q6S0 419 aa14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Ica1lQ3TY65 431 aa14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Fchsd2Q3USJ8 740 aa14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Nol12Q8BG17 217 aa14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Vps33aQ9D2N9 598 aa14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Cyp46a1Q9WVK8 500 aa14.83□□□□□ -0.04
Trim23-201ENSMUST00000022225 Zkscan7E9PVW1 718 aa14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Anapc15P60007 132 aa14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Ddx19aQ61655 478 aaKnown RBP14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Utp14aQ640M1 767 aaKnown RBP14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Cchcr1Q8K2I2 770 aa14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Pcdhgc5Q91XW9 944 aa14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Ccdc7Q9D541 371 aa14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 PalldQ9ET54 1408 aa14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Brpf1B2RRD7 1212 aa14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Elmsan1E9Q2I4 1089 aaKnown RBP14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Bach1P97302 739 aa14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Nol8Q3UHX0 1147 aaKnown RBP14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Ccdc178Q8CDV0 866 aa14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Zeb2Q9R0G7 1215 aa14.82□□□□□ -0.04
Trim23-201ENSMUST00000022225 Smarce1O54941 411 aaKnown RBP14.81□□□□□ -0.04
Trim23-201ENSMUST00000022225 Kif2aP28740 705 aa14.81□□□□□ -0.04
Trim23-201ENSMUST00000022225 Usp25P57080 1055 aa14.81□□□□□ -0.04
Trim23-201ENSMUST00000022225 Neo1P97798 1493 aa14.81□□□□□ -0.04
Trim23-201ENSMUST00000022225 Cdk12Q14AX6 1484 aaKnown RBP14.81□□□□□ -0.04
Trim23-201ENSMUST00000022225 Snx13Q6PHS6 957 aa14.81□□□□□ -0.04
Trim23-201ENSMUST00000022225 Ric3Q8BPM6 367 aa14.8□□□□□ -0.04
Trim23-201ENSMUST00000022225 Kif24Q6NWW5 1356 aa14.8□□□□□ -0.04
Trim23-201ENSMUST00000022225 CalcaP70160 136 aa14.8□□□□□ -0.04
Trim23-201ENSMUST00000022225 Ccz1Q8C1Y8 480 aa14.8□□□□□ -0.04
Trim23-201ENSMUST00000022225 KinQ8K339 391 aa14.8□□□□□ -0.04
Trim23-201ENSMUST00000022225 Ift172Q6VH22 1749 aa14.8□□□□□ -0.04
Trim23-201ENSMUST00000022225 Strn4P58404 760 aa14.8□□□□□ -0.04
Trim23-201ENSMUST00000022225 Ccdc96Q9CR92 584 aa14.8□□□□□ -0.04
Trim23-201ENSMUST00000022225 Creld2Q9CYA0 350 aa14.8□□□□□ -0.04
Trim23-201ENSMUST00000022225 Adgrb3Q80ZF8 1522 aa14.8□□□□□ -0.04
Trim23-201ENSMUST00000022225 MccE9PWI3 1003 aa14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 NmiO35309 314 aa14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 Utp18Q5SSI6 552 aaKnown RBP14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 IqubQ8CDK3 788 aa14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 DpydQ8CHR6 1025 aa14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 Gnai1B2RSH2 354 aa14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 Prune1Q8BIW1 454 aa14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 Wdr24Q8CFJ9 790 aa14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 RestQ8VIG1 1082 aa14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 Gnai3Q9DC51 354 aa14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 Fndc1E9Q043 1732 aa14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 Slc12a5Q91V14 1138 aa14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 PalmQ9Z0P4 383 aa14.79□□□□□ -0.04
Trim23-201ENSMUST00000022225 Dnajc2P54103 621 aaKnown RBP14.78□□□□□ -0.04
Trim23-201ENSMUST00000022225 Bcar3Q9QZK2 820 aa14.78□□□□□ -0.04
Trim23-201ENSMUST00000022225 Nos1Q9Z0J4 1429 aa14.78□□□□□ -0.04
Trim23-201ENSMUST00000022225 CenpjQ569L8 1344 aa14.78□□□□□ -0.04
Trim23-201ENSMUST00000022225 Pdzrn3Q69ZS0 1063 aa14.78□□□□□ -0.04
Trim23-201ENSMUST00000022225 Dixdc1Q80Y83 711 aa14.78□□□□□ -0.04
Trim23-201ENSMUST00000022225 Sf3a1Q8K4Z5 791 aaKnown RBP14.78□□□□□ -0.04
Trim23-201ENSMUST00000022225 Spata31d1bE9QA57 1361 aa14.77□□□□□ -0.04
Trim23-201ENSMUST00000022225 Trap1aP19473 224 aa14.77□□□□□ -0.04
Trim23-201ENSMUST00000022225 Ap5z1Q3U829 807 aa14.77□□□□□ -0.04
Trim23-201ENSMUST00000022225 Ttc27Q8CD92 847 aa14.77□□□□□ -0.04
Trim23-201ENSMUST00000022225 Nrbp1Q99J45 535 aa14.77□□□□□ -0.04
Trim23-201ENSMUST00000022225 Zfp804bA0A0G2JGH6 1343 aa14.77□□□□□ -0.05
Trim23-201ENSMUST00000022225 Fam53cQ8BXQ8 393 aa14.77□□□□□ -0.05
Trim23-201ENSMUST00000022225 Spata32Q8C5V0 334 aa14.77□□□□□ -0.05
Trim23-201ENSMUST00000022225 PdcQ9QW08 244 aa14.77□□□□□ -0.05
Trim23-201ENSMUST00000022225 Prr29B1ARI9 187 aa14.76□□□□□ -0.05
Trim23-201ENSMUST00000022225 TfrcQ62351 763 aaKnown RBP14.76□□□□□ -0.05
Trim23-201ENSMUST00000022225 Tshz3Q8CGV9 1081 aa14.76□□□□□ -0.05
Trim23-201ENSMUST00000022225 Synj2Q9D2G5 1434 aa14.76□□□□□ -0.05
Trim23-201ENSMUST00000022225 Morc2aQ69ZX6 1030 aa14.76□□□□□ -0.05
Trim23-201ENSMUST00000022225 Otud6bQ8K2H2 294 aa14.76□□□□□ -0.05
Trim23-201ENSMUST00000022225 Abca6Q8K441 1624 aa14.76□□□□□ -0.05
Trim23-201ENSMUST00000022225 Lrrc7Q80TE7 1490 aa14.76□□□□□ -0.05
Trim23-201ENSMUST00000022225 Zkscan2G3X952 960 aa14.76□□□□□ -0.05
Trim23-201ENSMUST00000022225 Phf23Q8BSN5 401 aa14.76□□□□□ -0.05
Trim23-201ENSMUST00000022225 Tlcd1Q99JT6 247 aa14.76□□□□□ -0.05
Trim23-201ENSMUST00000022225 Stx6Q9JKK1 255 aa14.76□□□□□ -0.05
Trim23-201ENSMUST00000022225 Frmd3Q8BHD4 595 aa14.75□□□□□ -0.05
Trim23-201ENSMUST00000022225 Senp3Q9EP97 568 aaKnown RBP14.75□□□□□ -0.05
Trim23-201ENSMUST00000022225 Hmx1O70218 332 aa14.75□□□□□ -0.05
Trim23-201ENSMUST00000022225 Nfe2l3Q9WTM4 660 aa14.75□□□□□ -0.05
Trim23-201ENSMUST00000022225 Cd22P35329 862 aa14.75□□□□□ -0.05
Trim23-201ENSMUST00000022225 Lrriq3Q14DL3 633 aa14.75□□□□□ -0.05
Trim23-201ENSMUST00000022225 Cep135Q6P5D4 1140 aa14.75□□□□□ -0.05
Trim23-201ENSMUST00000022225 Ubn2Q80WC1 1314 aa14.74□□□□□ -0.05
Trim23-201ENSMUST00000022225 Serpinb6bO08804 377 aa14.74□□□□□ -0.05
Trim23-201ENSMUST00000022225 Prkar2bP31324 416 aa14.74□□□□□ -0.05
Trim23-201ENSMUST00000022225 EappQ5BU09 281 aa14.74□□□□□ -0.05
Trim23-201ENSMUST00000022225 Usp16Q99LG0 825 aa14.74□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms