RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Fbxo41Q6NS60 873 aa14.12□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Gm10471E9Q1C7 252 aa14.11□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Sema6bO54951 886 aa14.11□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Klhdc4Q921I2 584 aa14.11□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Senp3Q9EP97 568 aaKnown RBP14.11□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Slit1Q80TR4 1531 aa14.1□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Nhsl1Q8CAF4 1587 aa14.1□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.1□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Aplp1Q03157 653 aa14.1□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Zranb3Q6NZP1 1069 aa14.1□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Aldh8a1Q8BH00 487 aa14.1□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Ppp1r37Q8BKR5 712 aa14.09□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Rab11fip3Q8CHD8 1047 aa14.09□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Arfgef2A2A5R2 1792 aa14.09□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Akap11E9Q777 1895 aa14.09□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Chl1P70232 1209 aa14.09□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Tbc1d9Q3UYK3 1264 aa14.09□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Eif4g2Q62448 906 aaKnown RBP14.09□□□□□ -0.15
Ddx56-201ENSMUST00000004507 MypopQ8R4U1 393 aa14.09□□□□□ -0.15
Ddx56-201ENSMUST00000004507 Cntnap1O54991 1385 aa14.09□□□□□ -0.15
Ddx56-201ENSMUST00000004507 HypkQ9CR41 129 aa14.08□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Simc1E9Q6E9 1354 aa14.08□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Ahnak2E9PYB0 1738 aaKnown RBP14.08□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Trpm3Q5F4S9 1721 aa14.08□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Gsdma3Q5Y4Y6 464 aa14.07□□□□□ -0.16
Ddx56-201ENSMUST00000004507 TmpoQ61033 693 aaKnown RBP14.07□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Psrc1Q9D0P7 329 aa14.07□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Gcc1Q9D4H2 778 aa14.07□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Plekhd1B2RPU2 505 aa14.07□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Tm6sf1P58749 370 aa14.07□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Zpr1Q62384 459 aa14.07□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Lrp6O88572 1613 aa14.06□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Mcm2P97310 904 aa14.06□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Nek4Q9Z1J2 792 aa14.06□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Eno4Q8C042 619 aa14.05□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Emilin2Q8K482 1074 aa14.05□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Zeb2Q9R0G7 1215 aa14.05□□□□□ -0.16
Ddx56-201ENSMUST00000004507 4933402E13RikQ9D4D2 429 aa14.05□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Kat6bQ8BRB7 1872 aa14.04□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Anapc15-psA0A140T8L6 141 aa14.04□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Triml2E9PW10 424 aa14.04□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Aifm3Q3TY86 605 aa14.04□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Phf23Q8BSN5 401 aa14.04□□□□□ -0.16
Ddx56-201ENSMUST00000004507 CenppQ9CZ92 286 aa14.04□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Fam50bQ9WTJ8 334 aa14.04□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Fam13aQ8BGI4 693 aa14.03□□□□□ -0.16
Ddx56-201ENSMUST00000004507 ThemisQ8BGW0 636 aa14.03□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Cc2d1aQ8K1A6 943 aa14.03□□□□□ -0.16
Ddx56-201ENSMUST00000004507 1700019A02RikA0A087WPV9 146 aa14.03□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Ccdc146E9Q9F7 977 aa14.03□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Kdm4cQ8VCD7 1054 aa14.03□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Tnks1bp1P58871 1720 aa14.02□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Snap23O09044 210 aa14.02□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Ccdc129Q14B48 1034 aa14.02□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Rsph3aQ3UFY4 516 aa14.02□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Cypt2Q6P924 180 aa14.02□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Amotl1Q9D4H4 968 aa14.02□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Tfip11Q9ERA6 838 aaKnown RBP14.02□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Fer1l6E0CZ42 1862 aa14.02□□□□□ -0.16
Ddx56-201ENSMUST00000004507 Rtf1A2AQ19 715 aaKnown RBP14.02□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Fgd1P52734 960 aa14.02□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Ssh1Q76I79 1042 aa14.02□□□□□ -0.17
Ddx56-201ENSMUST00000004507 FanclQ9CR14 375 aa14.02□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Tnrc6cQ3UHC0 1690 aaKnown RBP14.01□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Sf3b2Q3UJB0 878 aaKnown RBP14.01□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Ggnbp2Q5SV77 696 aa14.01□□□□□ -0.17
Ddx56-201ENSMUST00000004507 GorabQ8BRM2 368 aa14.01□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Nsfl1cQ9CZ44 370 aaKnown RBP14.01□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Cacna1sQ02789 1880 aa14.01□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Shank2Q80Z38 1476 aa14.01□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Prkar2bP31324 416 aa14□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Mcm4P49717 862 aa14□□□□□ -0.17
Ddx56-201ENSMUST00000004507 1700010I14RikQ7TPG0 532 aa14□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Igsf1Q7TQA1 1317 aa14□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Rfx1P48377 963 aa14□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Fnbp4Q6ZQ03 1031 aa13.99□□□□□ -0.17
Ddx56-201ENSMUST00000004507 4930572O03RikQ8C5Y0 211 aa13.99□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Nup153E9Q3G8 1462 aaKnown RBP13.98□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Msh6P54276 1358 aaKnown RBP13.98□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Pibf1E9Q6K3 756 aa13.98□□□□□ -0.17
Ddx56-201ENSMUST00000004507 InhbeO08717 350 aa13.98□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Prim1P20664 417 aa13.98□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Sv2bQ8BG39 683 aa13.98□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Mast2Q60592 1734 aa13.98□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Ppp6r3Q922D4 844 aa13.98□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Speer4bQ9D9F7 267 aa13.98□□□□□ -0.17
Ddx56-201ENSMUST00000004507 ScaperF8VQ70 1398 aaKnown RBP13.97□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Aox2Q5SGK3 1345 aa13.97□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Ddit3P35639 168 aa13.97□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Ppip5k2Q6ZQB6 1129 aa13.97□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Pm20d1Q8C165 503 aa13.97□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Myo5bP21271 1818 aa13.97□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Gm21680A0A0G2JGR8 267 aa13.96□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Spryd3E9Q9B3 442 aa13.96□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Nucb1Q02819 459 aaKnown RBP13.96□□□□□ -0.17
Ddx56-201ENSMUST00000004507 EngaseQ8BX80 734 aa13.96□□□□□ -0.17
Ddx56-201ENSMUST00000004507 Plcb2A3KGF7 1181 aa13.96□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Pdia3P27773 505 aaKnown RBP13.96□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Sgsm1Q8BPQ7 1093 aa13.96□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Smarca5Q91ZW3 1051 aaKnown RBP13.96□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms