RNA–Protein interactions for RNA: ENSMUST00000000619.7

Clcn4-201, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clcn4, Length 4,607 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-201ENSMUST00000000619 Mrps27Q8BK72 415 aaKnown RBP13.46□□□□□ -0.25
Clcn4-201ENSMUST00000000619 4931400O07RikQ9D4M5 137 aa13.46□□□□□ -0.25
Clcn4-201ENSMUST00000000619 LlphQ9D945 130 aaKnown RBP13.46□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Dmrtc1Q9D9R7 182 aa13.46□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Elp1Q7TT37 1333 aaKnown RBP13.46□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Gm973E9Q295 1059 aa13.46□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Smc4Q8CG47 1286 aa13.46□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Kcnh5Q920E3 988 aa13.46□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Clstn1Q9EPL2 979 aa13.46□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Gdpd2Q9ESM6 539 aa13.46□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Nol8Q3UHX0 1147 aaKnown RBP13.45□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Ccdc155Q80VJ8 648 aa13.45□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Nlgn1Q99K10 843 aa13.45□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Gm21698A0A087WQP8 267 aa13.45□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Gm21671G3UY31 267 aa13.45□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Chl1P70232 1209 aa13.45□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Ccdc173A0JLY1 547 aa13.45□□□□□ -0.26
Clcn4-201ENSMUST00000000619 TkfcQ8VC30 578 aa13.45□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Iqsec2Q5DU25 1478 aa13.44□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Mcmdc2E9Q956 681 aa13.44□□□□□ -0.26
Clcn4-201ENSMUST00000000619 RdxP26043 583 aaKnown RBP13.44□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Idi1P58044 227 aa13.44□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Slc26a8Q8R0C3 999 aa13.44□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Med14A2ABV5 1459 aaKnown RBP13.44□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Zkscan16A2ALW2 728 aa13.44□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Nckap5lQ6GQX2 1323 aa13.44□□□□□ -0.26
Clcn4-201ENSMUST00000000619 PnnO35691 725 aaKnown RBP13.44□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Kif24Q6NWW5 1356 aa13.44□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Map3k2Q61083 619 aa13.43□□□□□ -0.26
Clcn4-201ENSMUST00000000619 MarsQ68FL6 902 aaKnown RBP13.43□□□□□ -0.26
Clcn4-201ENSMUST00000000619 NaspQ99MD9 773 aaKnown RBP13.43□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Antxr1Q9CZ52 562 aa13.43□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Cyp27a1Q9DBG1 533 aa13.43□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Hoxc9P09633 260 aa13.43□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Cnnm3Q32NY4 713 aa13.43□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Samm50Q8BGH2 469 aa13.43□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Echdc1Q9D9V3 322 aa13.43□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Atf3Q60765 181 aa13.43□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Adgrl1Q80TR1 1466 aa13.43□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Mmp8O70138 465 aa13.43□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Abca9Q8K449 1623 aa13.42□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Trim30aP15533 496 aa13.42□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Slx4ipQ9D7Y9 413 aa13.42□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Dip2cE9PWR4 1557 aa13.42□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Strn4P58404 760 aa13.42□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Sytl4Q9R0Q1 673 aa13.42□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Fam50bQ9WTJ8 334 aa13.42□□□□□ -0.26
Clcn4-201ENSMUST00000000619 MaddQ80U28 1577 aa13.42□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Ddx19aQ61655 478 aaKnown RBP13.41□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Tmx3Q8BXZ1 456 aa13.41□□□□□ -0.26
Clcn4-201ENSMUST00000000619 PzpQ61838 1495 aa13.41□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Uhrf1bp1B2KF50 1429 aa13.41□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Prune1Q8BIW1 454 aa13.41□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Cep170bQ80U49 1574 aa13.41□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Gadd45bP22339 160 aa13.41□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Rbm27Q5SFM8 1060 aaKnown RBP13.41□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Rbm10Q99KG3 930 aaKnown RBP13.41□□□□□ -0.26
Clcn4-201ENSMUST00000000619 TimelessQ9R1X4 1197 aa13.41□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Abca17E9PX95 1733 aa13.41□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Il1rapl2Q9ERS6 686 aa13.4□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Rcan3Q9JKK0 239 aa13.4□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Ier5O89113 308 aa13.4□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Anapc15P60007 132 aa13.4□□□□□ -0.26
Clcn4-201ENSMUST00000000619 GnpatP98192 678 aa13.4□□□□□ -0.26
Clcn4-201ENSMUST00000000619 BcanQ61361 883 aa13.4□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Pknox2Q8BG99 474 aa13.4□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Noc3lQ8VI84 807 aaKnown RBP13.4□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Amotl1Q9D4H4 968 aa13.4□□□□□ -0.26
Clcn4-201ENSMUST00000000619 Tpm2P58774 284 aa13.4□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Kiaa0754Q69ZZ9 979 aa13.4□□□□□ -0.27
Clcn4-201ENSMUST00000000619 PdcQ9QW08 244 aa13.4□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Irf9Q61179 399 aa13.39□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Ncapd2Q8K2Z4 1392 aa13.39□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Ahdc1Q6PAL7 1594 aaKnown RBP13.39□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Dnajc10Q9DC23 793 aa13.39□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Pa2g4P50580 394 aaKnown RBP13.39□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Rhot2Q8JZN7 620 aa13.38□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Kif2cQ922S8 721 aa13.38□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Tecpr2Q3UH45 1423 aa13.38□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Tpx2A2APB8 745 aaKnown RBP13.38□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Zpr1Q62384 459 aa13.38□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Zbtb22Q9Z0G7 638 aa13.38□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Cdc42bpgQ80UW5 1551 aa13.38□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Mroh1E0CZ22 1640 aa13.38□□□□□ -0.27
Clcn4-201ENSMUST00000000619 EzrP26040 586 aaKnown RBP13.38□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Speer4bQ9D9F7 267 aa13.38□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Stx6Q9JKK1 255 aa13.38□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Atp7bQ64446 1462 aa13.38□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Mcm3P25206 812 aaKnown RBP13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Mum1Q6DID5 682 aa13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Med4Q9CQA5 270 aa13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Bag3Q9JLV1 577 aaKnown RBP13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Abca8aQ8K442 1620 aa13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Gm21663A0A0G2JE01 267 aa13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Gm7361D3Z6R1 267 aa13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 5031410I06RikE9Q4E0 267 aa13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Gm1979E9QAN3 267 aa13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Gm5862K7N5V5 267 aa13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Gm10220K7N660 267 aa13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 GpkowQ56A08 488 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms