Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
GPC6Q9Y625 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
GPC6Q9Y625 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.77■□□□□ 0.44
GPC6Q9Y625 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.77■□□□□ 0.44
GPC6Q9Y625 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC6Q9Y625 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC6Q9Y625 ABHD17AP1-201ENST00000358206 933 ntBASIC17.77■□□□□ 0.44
GPC6Q9Y625 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GPC6Q9Y625 AC133681.1-201ENST00000465482 601 ntBASIC17.77■□□□□ 0.44
GPC6Q9Y625 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC6Q9Y625 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GPC6Q9Y625 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC6Q9Y625 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.77■□□□□ 0.44
GPC6Q9Y625 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
GPC6Q9Y625 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GPC6Q9Y625 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC6Q9Y625 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.77■□□□□ 0.43
GPC6Q9Y625 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.77■□□□□ 0.43
GPC6Q9Y625 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC6Q9Y625 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
GPC6Q9Y625 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC6Q9Y625 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.77■□□□□ 0.43
GPC6Q9Y625 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC6Q9Y625 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
GPC6Q9Y625 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC6Q9Y625 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.77■□□□□ 0.43
GPC6Q9Y625 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC6Q9Y625 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
GPC6Q9Y625 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GPC6Q9Y625 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC6Q9Y625 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC6Q9Y625 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GPC6Q9Y625 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC6Q9Y625 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC6Q9Y625 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GPC6Q9Y625 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 KRASP1-201ENST00000407852 552 ntBASIC17.76■□□□□ 0.43
GPC6Q9Y625 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GPC6Q9Y625 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC6Q9Y625 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC6Q9Y625 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC6Q9Y625 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GPC6Q9Y625 PRORSD1P-202ENST00000563365 2154 ntBASIC17.76■□□□□ 0.43
GPC6Q9Y625 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC6Q9Y625 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC6Q9Y625 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC6Q9Y625 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GPC6Q9Y625 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 C1QBPP2-201ENST00000528754 825 ntBASIC17.75■□□□□ 0.43
GPC6Q9Y625 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 AC124016.1-201ENST00000609552 612 ntBASIC17.75■□□□□ 0.43
GPC6Q9Y625 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GPC6Q9Y625 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC6Q9Y625 Z98044.1-201ENST00000632503 1764 ntBASIC17.75■□□□□ 0.43
GPC6Q9Y625 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC6Q9Y625 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC6Q9Y625 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC6Q9Y625 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 TNRC18P3-201ENST00000441896 2691 ntBASIC17.75■□□□□ 0.43
GPC6Q9Y625 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC6Q9Y625 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms