Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 AP001412.1-201ENST00000608405 714 ntBASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 AC130371.2-201ENST00000619443 611 ntBASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 CD177P1-201ENST00000606252 935 ntBASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 MIR6786-201ENST00000616843 113 ntBASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA11Q9Y5H2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 AL512353.2-201ENST00000448759 1962 ntBASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 FAM197Y1-201ENST00000421178 764 ntBASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 FAM207BP-201ENST00000447172 505 ntBASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA11Q9Y5H2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHGA11Q9Y5H2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 ABHD17AP1-201ENST00000358206 933 ntBASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 RPS2P55-201ENST00000397318 883 ntBASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 AC012618.2-201ENST00000428058 849 ntBASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 B3GAT3P1-201ENST00000471720 806 ntBASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 AC011506.1-201ENST00000474329 610 ntBASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 AC107956.1-201ENST00000494359 873 ntBASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms