Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AL121894.2-201ENST00000602977 491 ntBASIC19.62■□□□□ 0.73
YIPF1Q9Y548 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 AL032819.2-201ENST00000624543 2162 ntBASIC19.61■□□□□ 0.73
YIPF1Q9Y548 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 TSSC2-201ENST00000450217 709 ntBASIC19.61■□□□□ 0.73
YIPF1Q9Y548 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 AL121672.3-201ENST00000608644 468 ntBASIC19.61■□□□□ 0.73
YIPF1Q9Y548 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 AC068587.9-201ENST00000641814 219 ntBASIC19.61■□□□□ 0.73
YIPF1Q9Y548 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 AC034236.2-201ENST00000606662 1610 ntBASIC19.61■□□□□ 0.73
YIPF1Q9Y548 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 AC093525.10-201ENST00000625130 1569 ntBASIC19.61■□□□□ 0.73
YIPF1Q9Y548 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
YIPF1Q9Y548 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 MIR662-201ENST00000384847 95 ntBASIC19.6■□□□□ 0.73
YIPF1Q9Y548 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 BX276092.5-203ENST00000456199 560 ntBASIC19.6■□□□□ 0.73
YIPF1Q9Y548 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 AC012313.10-201ENST00000623509 926 ntBASIC19.6■□□□□ 0.73
YIPF1Q9Y548 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YIPF1Q9Y548 AIRN-201ENST00000601203 4374 ntBASIC19.6■□□□□ 0.73
YIPF1Q9Y548 AC006333.2-201ENST00000607957 2099 ntBASIC19.6■□□□□ 0.73
YIPF1Q9Y548 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 AC016734.2-201ENST00000624325 1377 ntBASIC19.59■□□□□ 0.73
YIPF1Q9Y548 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 AC093484.2-201ENST00000580996 2166 ntBASIC19.59■□□□□ 0.73
YIPF1Q9Y548 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 AL450487.1-201ENST00000426799 995 ntBASIC19.59■□□□□ 0.73
YIPF1Q9Y548 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
YIPF1Q9Y548 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.58■□□□□ 0.73
YIPF1Q9Y548 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
YIPF1Q9Y548 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
YIPF1Q9Y548 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
YIPF1Q9Y548 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
YIPF1Q9Y548 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
YIPF1Q9Y548 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
YIPF1Q9Y548 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.58■□□□□ 0.73
YIPF1Q9Y548 AC007952.6-201ENST00000573168 2673 ntBASIC19.58■□□□□ 0.73
YIPF1Q9Y548 AC003957.1-201ENST00000625108 2673 ntBASIC19.58■□□□□ 0.73
YIPF1Q9Y548 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
YIPF1Q9Y548 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms