Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 TSPY20P-201ENST00000450910 630 ntBASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 FAM201B-201ENST00000458407 597 ntBASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDD3Q9Y3P4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 PKD1P1-201ENST00000458669 6805 ntBASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RHBDD3Q9Y3P4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
RHBDD3Q9Y3P4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RHBDD3Q9Y3P4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.46■□□□□ 0.22
RHBDD3Q9Y3P4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RHBDD3Q9Y3P4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.46■□□□□ 0.22
RHBDD3Q9Y3P4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 RPPH1-201ENST00000516869 333 ntBASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDD3Q9Y3P4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RHBDD3Q9Y3P4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RHBDD3Q9Y3P4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RHBDD3Q9Y3P4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.44■□□□□ 0.22
RHBDD3Q9Y3P4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RHBDD3Q9Y3P4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.44■□□□□ 0.22
RHBDD3Q9Y3P4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms