Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 KRT18P29-201ENST00000397031 1267 ntBASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 TSPY23P-201ENST00000440136 739 ntBASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR1DQ9Y2S0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 NIFKP9-201ENST00000419265 221 ntBASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 AL445675.2-201ENST00000620291 557 ntBASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1DQ9Y2S0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 RPPH1-201ENST00000516869 333 ntBASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1DQ9Y2S0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR1DQ9Y2S0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR1DQ9Y2S0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR1DQ9Y2S0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
POLR1DQ9Y2S0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.77■□□□□ 0.27
POLR1DQ9Y2S0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
POLR1DQ9Y2S0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
POLR1DQ9Y2S0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
POLR1DQ9Y2S0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1DQ9Y2S0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
POLR1DQ9Y2S0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1DQ9Y2S0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1DQ9Y2S0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1DQ9Y2S0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR1DQ9Y2S0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1DQ9Y2S0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1DQ9Y2S0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1DQ9Y2S0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR1DQ9Y2S0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1DQ9Y2S0 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.76■□□□□ 0.27
POLR1DQ9Y2S0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms