Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 AC134043.2-201ENST00000624206 2238 ntBASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 KRT18P11-201ENST00000435214 1283 ntBASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 GPX1P1-201ENST00000388829 606 ntBASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 AC005837.3-201ENST00000612163 286 ntBASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCL1Q9Y2P8 AC010980.2-201ENST00000587099 1412 ntBASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 BID-214ENST00000617586 542 ntTSL 5 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 AC008694.1-202ENST00000636953 945 ntBASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms