Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 HLA-J-203ENST00000494367 1087 ntBASIC17.74■□□□□ 0.43
LHX6Q9UPM6 AC074051.2-201ENST00000565115 352 ntBASIC17.74■□□□□ 0.43
LHX6Q9UPM6 TP73-AS1-207ENST00000624167 988 ntBASIC17.74■□□□□ 0.43
LHX6Q9UPM6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LHX6Q9UPM6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 AC099336.1-202ENST00000602961 463 ntBASIC17.73■□□□□ 0.43
LHX6Q9UPM6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 ZNF259P1-201ENST00000407656 1365 ntBASIC17.73■□□□□ 0.43
LHX6Q9UPM6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LHX6Q9UPM6 TMEM179-206ENST00000616017 1645 ntBASIC17.72■□□□□ 0.43
LHX6Q9UPM6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 UPF3AP3-201ENST00000420996 769 ntBASIC17.72■□□□□ 0.43
LHX6Q9UPM6 ARL4AP4-201ENST00000434170 518 ntBASIC17.72■□□□□ 0.43
LHX6Q9UPM6 FAM197Y8-203ENST00000450145 560 ntBASIC17.72■□□□□ 0.43
LHX6Q9UPM6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX6Q9UPM6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 RPL13AP23-201ENST00000480739 586 ntBASIC17.71■□□□□ 0.43
LHX6Q9UPM6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.71■□□□□ 0.43
LHX6Q9UPM6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms