Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.22■□□□□ 0.83
GTF3C4Q9UKN8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 ATP5G1P1-201ENST00000448724 379 ntBASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 AP003041.3-201ENST00000527151 707 ntBASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 AC010331.1-201ENST00000611423 582 ntBASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
GTF3C4Q9UKN8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 Z98044.1-201ENST00000632503 1764 ntBASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.2■□□□□ 0.82
GTF3C4Q9UKN8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 AIRN-201ENST00000601203 4374 ntBASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.19■□□□□ 0.82
GTF3C4Q9UKN8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 AC104076.2-201ENST00000448912 469 ntBASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.18■□□□□ 0.82
GTF3C4Q9UKN8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms