Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX41Q9UJV9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
DDX41Q9UJV9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
DDX41Q9UJV9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
DDX41Q9UJV9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX41Q9UJV9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX41Q9UJV9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 MYC-208ENST00000641036 567 ntBASIC21.57■■□□□ 1.04
DDX41Q9UJV9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX41Q9UJV9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 LINC01238-205ENST00000567549 1107 ntBASIC21.56■■□□□ 1.04
DDX41Q9UJV9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX41Q9UJV9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 KRT8P45-201ENST00000414328 1447 ntBASIC21.55■■□□□ 1.04
DDX41Q9UJV9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.55■■□□□ 1.04
DDX41Q9UJV9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms