Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 AP000550.4-202ENST00000639755 178 ntBASIC17.24■□□□□ 0.35
LRFN1Q9P244 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LRFN1Q9P244 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.24■□□□□ 0.35
LRFN1Q9P244 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 HCG11-201ENST00000411553 5696 ntBASIC17.24■□□□□ 0.35
LRFN1Q9P244 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN1Q9P244 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN1Q9P244 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN1Q9P244 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN1Q9P244 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN1Q9P244 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN1Q9P244 PCED1CP-201ENST00000419887 785 ntBASIC17.23■□□□□ 0.35
LRFN1Q9P244 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN1Q9P244 UPK3BP1-201ENST00000428678 509 ntBASIC17.23■□□□□ 0.35
LRFN1Q9P244 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 FAM86EP-206ENST00000510506 987 ntBASIC17.23■□□□□ 0.35
LRFN1Q9P244 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN1Q9P244 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN1Q9P244 IRX1P1-201ENST00000438849 1838 ntBASIC17.23■□□□□ 0.35
LRFN1Q9P244 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN1Q9P244 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.23■□□□□ 0.35
LRFN1Q9P244 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN1Q9P244 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.22■□□□□ 0.35
LRFN1Q9P244 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.22■□□□□ 0.35
LRFN1Q9P244 AC034232.1-201ENST00000506026 1064 ntBASIC17.22■□□□□ 0.35
LRFN1Q9P244 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 AC024243.1-201ENST00000609234 778 ntBASIC17.22■□□□□ 0.35
LRFN1Q9P244 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
LRFN1Q9P244 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 AL512353.2-201ENST00000448759 1962 ntBASIC17.22■□□□□ 0.35
LRFN1Q9P244 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN1Q9P244 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRFN1Q9P244 RCC2P3-201ENST00000418112 1537 ntBASIC17.21■□□□□ 0.35
LRFN1Q9P244 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
LRFN1Q9P244 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.21■□□□□ 0.35
LRFN1Q9P244 AC141586.3-201ENST00000562166 1838 ntBASIC17.21■□□□□ 0.35
LRFN1Q9P244 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRFN1Q9P244 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRFN1Q9P244 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRFN1Q9P244 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRFN1Q9P244 SPDYE15P-201ENST00000424157 909 ntBASIC17.21■□□□□ 0.35
LRFN1Q9P244 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRFN1Q9P244 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.21■□□□□ 0.35
LRFN1Q9P244 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
LRFN1Q9P244 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.21■□□□□ 0.35
LRFN1Q9P244 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRFN1Q9P244 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRFN1Q9P244 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRFN1Q9P244 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.21■□□□□ 0.34
LRFN1Q9P244 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRFN1Q9P244 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms