Protein–RNA interactions for Protein: Q9NW08

POLR3B, DNA-directed RNA polymerase III subunit RPC2, humanhuman

Predicted RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3BQ9NW08 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.32■□□□□ 0.68
POLR3BQ9NW08 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.32■□□□□ 0.68
POLR3BQ9NW08 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
POLR3BQ9NW08 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.32■□□□□ 0.68
POLR3BQ9NW08 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3BQ9NW08 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR3BQ9NW08 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3BQ9NW08 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3BQ9NW08 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3BQ9NW08 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
POLR3BQ9NW08 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
POLR3BQ9NW08 BX323043.1-201ENST00000641006 1765 ntBASIC19.32■□□□□ 0.68
POLR3BQ9NW08 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
POLR3BQ9NW08 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 STARP1-201ENST00000397973 869 ntBASIC19.3■□□□□ 0.68
POLR3BQ9NW08 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 AC092119.3-201ENST00000612618 583 ntBASIC19.3■□□□□ 0.68
POLR3BQ9NW08 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3BQ9NW08 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 AP000523.1-201ENST00000398242 1049 ntBASIC19.29■□□□□ 0.68
POLR3BQ9NW08 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3BQ9NW08 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms