Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 CCR12P-201ENST00000446203 998 ntBASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 AC116562.4-202ENST00000641738 218 ntBASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BLOC1S4Q9NUP1 KRT8P45-201ENST00000414328 1447 ntBASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 AC087499.1-201ENST00000418141 1075 ntBASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 NAPSB-206ENST00000562112 1266 ntBASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BLOC1S4Q9NUP1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 AC036111.1-201ENST00000533973 1582 ntBASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 FAM87A-204ENST00000613235 858 ntBASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 CR769767.2-201ENST00000622735 460 ntBASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 AC010653.2-201ENST00000623505 997 ntBASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.86■□□□□ 0.93
BLOC1S4Q9NUP1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 KRT18P41-201ENST00000518924 1277 ntBASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 MIR3180-5-201ENST00000583743 153 ntBASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms