Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 AL109659.2-201ENST00000606809 1674 ntBASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 TSPY15P-201ENST00000457163 923 ntBASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 AC008622.2-201ENST00000617006 1229 ntBASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBQLN4Q9NRR5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
UBQLN4Q9NRR5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBQLN4Q9NRR5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 AL138781.2-201ENST00000617896 1843 ntBASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 MMP23A-201ENST00000234610 1017 ntBASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 AL353719.1-201ENST00000566847 864 ntBASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 AC116562.4-202ENST00000641738 218 ntBASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN4Q9NRR5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 MTMR9LP-203ENST00000426597 1545 ntBASIC17.25■□□□□ 0.35
UBQLN4Q9NRR5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 AC138932.1-201ENST00000534164 6830 ntBASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 ANO7L1-203ENST00000602586 1720 ntBASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms