Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 STK11-202ENST00000585465 3554 ntTSL 517.96■□□□□ 0.472e-6■■□□□ 13.8
DROSHAQ9NRR4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.817e-7■■□□□ 13.8
DROSHAQ9NRR4 CREB1-204ENST00000421139 713 ntTSL 526.79■■□□□ 1.887e-7■■□□□ 13.8
DROSHAQ9NRR4 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.467e-7■■□□□ 13.8
DROSHAQ9NRR4 CREB1-206ENST00000432329 7650 ntTSL 1 (best) BASIC11.73□□□□□ -0.537e-7■■□□□ 13.8
DROSHAQ9NRR4 CREB1-211ENST00000452474 518 ntTSL 410.1□□□□□ -0.797e-7■■□□□ 13.8
DROSHAQ9NRR4 CREB1-216ENST00000494094 580 ntTSL 210.1□□□□□ -0.797e-7■■□□□ 13.8
DROSHAQ9NRR4 CREB1-207ENST00000445803 651 ntTSL 44.1□□□□□ -1.757e-7■■□□□ 13.8
DROSHAQ9NRR4 GMCL1-202ENST00000468386 808 ntTSL 537.26■■■■□ 3.554e-8■■□□□ 13.8
DROSHAQ9NRR4 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.424e-8■■□□□ 13.8
DROSHAQ9NRR4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC22.08■■□□□ 1.123e-7■■□□□ 13.8
DROSHAQ9NRR4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC38.3■■■■□ 3.722e-6■■□□□ 13.8
DROSHAQ9NRR4 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.532e-6■■□□□ 13.8
DROSHAQ9NRR4 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC21.02■□□□□ 0.969e-27■■□□□ 13.8
DROSHAQ9NRR4 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.629e-27■■□□□ 13.8
DROSHAQ9NRR4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.952e-8■■□□□ 13.8
DROSHAQ9NRR4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.662e-8■■□□□ 13.8
DROSHAQ9NRR4 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.062e-8■■□□□ 13.8
DROSHAQ9NRR4 STXBP2-214ENST00000599400 811 ntTSL 522.91■■□□□ 1.262e-23■■□□□ 13.8
DROSHAQ9NRR4 STXBP2-217ENST00000599737 1523 ntTSL 522.45■■□□□ 1.182e-23■■□□□ 13.8
DROSHAQ9NRR4 STXBP2-219ENST00000600702 770 ntTSL 220.74■□□□□ 0.912e-23■■□□□ 13.8
DROSHAQ9NRR4 SCART1-205ENST00000488261 4709 ntTSL 224.31■■□□□ 1.481e-6■■□□□ 13.8
DROSHAQ9NRR4 SCART1-202ENST00000463137 4756 ntTSL 223.63■■□□□ 1.371e-6■■□□□ 13.8
DROSHAQ9NRR4 SCART1-204ENST00000482993 4904 ntTSL 223.18■■□□□ 1.31e-6■■□□□ 13.8
DROSHAQ9NRR4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.81e-6■■□□□ 13.8
DROSHAQ9NRR4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.553e-7■■□□□ 13.8
DROSHAQ9NRR4 ETFB-203ENST00000593992 603 ntTSL 224.1■■□□□ 1.453e-7■■□□□ 13.8
DROSHAQ9NRR4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.413e-7■■□□□ 13.8
DROSHAQ9NRR4 ETFB-205ENST00000596253 575 ntTSL 322.96■■□□□ 1.273e-7■■□□□ 13.8
DROSHAQ9NRR4 ARFGAP1-208ENST00000518691 1162 ntTSL 229.93■■■□□ 2.385e-18■■□□□ 13.8
DROSHAQ9NRR4 ARFGAP1-213ENST00000520022 558 ntTSL 427.14■■□□□ 1.945e-18■■□□□ 13.8
DROSHAQ9NRR4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.063e-6■■□□□ 13.8
DROSHAQ9NRR4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.833e-6■■□□□ 13.8
DROSHAQ9NRR4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.86■□□□□ 0.773e-6■■□□□ 13.8
DROSHAQ9NRR4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC48.3■■■■■ 5.321e-9■■□□□ 13.8
DROSHAQ9NRR4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC23.75■■□□□ 1.391e-6■■□□□ 13.8
DROSHAQ9NRR4 ROR2-205ENST00000495386 664 ntTSL 321.61■■□□□ 1.051e-6■■□□□ 13.8
DROSHAQ9NRR4 ROR2-206ENST00000546883 501 ntTSL 320.21■□□□□ 0.831e-6■■□□□ 13.8
DROSHAQ9NRR4 UBL5-204ENST00000588595 546 ntTSL 232.07■■■□□ 2.721e-6■■□□□ 13.8
DROSHAQ9NRR4 UBL5-203ENST00000588141 573 ntTSL 432.07■■■□□ 2.721e-6■■□□□ 13.8
DROSHAQ9NRR4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.391e-6■■□□□ 13.8
DROSHAQ9NRR4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.31e-6■■□□□ 13.8
DROSHAQ9NRR4 UBL5-206ENST00000589960 307 ntTSL 327.89■■■□□ 2.061e-6■■□□□ 13.8
DROSHAQ9NRR4 UBL5-205ENST00000589372 1450 ntTSL 227.74■■■□□ 2.031e-6■■□□□ 13.8
DROSHAQ9NRR4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC23.8■■□□□ 1.41e-6■■□□□ 13.8
DROSHAQ9NRR4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.131e-6■■□□□ 13.8
DROSHAQ9NRR4 XIST-206ENST00000434839 2865 ntTSL 5 BASIC9.93□□□□□ -0.825e-7■■□□□ 13.7
DROSHAQ9NRR4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.26□□□□□ -1.575e-7■■□□□ 13.7
DROSHAQ9NRR4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.212e-7■■□□□ 13.7
DROSHAQ9NRR4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC22.35■■□□□ 1.172e-7■■□□□ 13.7
DROSHAQ9NRR4 GATAD2A-209ENST00000448576 271 ntTSL 344.26■■■■■ 4.681e-6■■□□□ 13.7
DROSHAQ9NRR4 GATAD2A-210ENST00000457895 729 ntTSL 233.47■■■□□ 2.951e-6■■□□□ 13.7
DROSHAQ9NRR4 GATAD2A-212ENST00000494516 640 ntTSL 231.22■■■□□ 2.591e-6■■□□□ 13.7
DROSHAQ9NRR4 GATAD2A-204ENST00000417582 655 ntTSL 230.66■■■□□ 2.51e-6■■□□□ 13.7
DROSHAQ9NRR4 GATAD2A-213ENST00000609040 1652 ntTSL 228.73■■■□□ 2.191e-6■■□□□ 13.7
DROSHAQ9NRR4 RABL6-205ENST00000435930 3328 ntTSL 219.93■□□□□ 0.781e-6■■□□□ 13.7
DROSHAQ9NRR4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.771e-6■■□□□ 13.7
DROSHAQ9NRR4 FASTK-213ENST00000482806 1826 ntTSL 534.15■■■■□ 3.062e-7■■□□□ 13.7
DROSHAQ9NRR4 FASTK-216ENST00000496663 818 ntTSL 233.67■■■□□ 2.982e-7■■□□□ 13.7
DROSHAQ9NRR4 FASTK-215ENST00000489884 1751 ntTSL 1 (best)33.23■■■□□ 2.912e-7■■□□□ 13.7
DROSHAQ9NRR4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC32.68■■■□□ 2.822e-7■■□□□ 13.7
DROSHAQ9NRR4 FASTK-205ENST00000461979 720 ntTSL 532.56■■■□□ 2.82e-7■■□□□ 13.7
DROSHAQ9NRR4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC31.78■■■□□ 2.682e-7■■□□□ 13.7
DROSHAQ9NRR4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.52e-7■■□□□ 13.7
DROSHAQ9NRR4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC27.54■■■□□ 22e-7■■□□□ 13.7
DROSHAQ9NRR4 FASTK-204ENST00000460980 1521 ntTSL 524.19■■□□□ 1.462e-7■■□□□ 13.7
DROSHAQ9NRR4 UCKL1-207ENST00000632800 1530 ntTSL 522.02■■□□□ 1.127e-7■■□□□ 13.7
DROSHAQ9NRR4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC43.76■■■■■ 4.69e-7■■□□□ 13.7
DROSHAQ9NRR4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC42.56■■■■■ 4.43e-18■■□□□ 13.7
DROSHAQ9NRR4 ODC1-204ENST00000446285 665 ntTSL 541.12■■■■■ 4.175e-16■■□□□ 13.7
DROSHAQ9NRR4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.279e-7■■□□□ 13.7
DROSHAQ9NRR4 PUF60-222ENST00000533362 616 ntTSL 534.38■■■■□ 3.099e-7■■□□□ 13.7
DROSHAQ9NRR4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.971e-8■■□□□ 13.7
DROSHAQ9NRR4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.969e-7■■□□□ 13.7
DROSHAQ9NRR4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC33.25■■■□□ 2.919e-7■■□□□ 13.7
DROSHAQ9NRR4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC33.19■■■□□ 2.91e-6■■□□□ 13.7
DROSHAQ9NRR4 TSEN15-206ENST00000485209 806 ntTSL 332.96■■■□□ 2.879e-7■■□□□ 13.7
DROSHAQ9NRR4 POLR2E-205ENST00000586817 2441 ntTSL 232.24■■■□□ 2.751e-6■■□□□ 13.7
DROSHAQ9NRR4 IPO7-202ENST00000527431 607 ntTSL 431.88■■■□□ 2.699e-7■■□□□ 13.7
DROSHAQ9NRR4 SSBP4-210ENST00000601444 427 ntTSL 530.7■■■□□ 2.511e-8■■□□□ 13.7
DROSHAQ9NRR4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC30.5■■■□□ 2.479e-7■■□□□ 13.7
DROSHAQ9NRR4 FLOT2-208ENST00000582174 703 ntTSL 330.28■■■□□ 2.441e-6■■□□□ 13.7
DROSHAQ9NRR4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC29.84■■■□□ 2.371e-8■■□□□ 13.7
DROSHAQ9NRR4 AP2A2-218ENST00000529858 550 ntTSL 429.77■■■□□ 2.361e-11■■□□□ 13.7
DROSHAQ9NRR4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC29.77■■■□□ 2.369e-7■■□□□ 13.7
DROSHAQ9NRR4 CMAS-202ENST00000534981 1575 ntTSL 1 (best)29.73■■■□□ 2.353e-18■■□□□ 13.7
DROSHAQ9NRR4 TSEN15-205ENST00000462677 1628 ntTSL 1 (best)29.43■■■□□ 2.39e-7■■□□□ 13.7
DROSHAQ9NRR4 TSEN15-202ENST00000367518 573 ntTSL 329.17■■■□□ 2.269e-7■■□□□ 13.7
DROSHAQ9NRR4 FLOT2-212ENST00000593158 752 ntTSL 528.9■■■□□ 2.221e-6■■□□□ 13.7
DROSHAQ9NRR4 COPS6-206ENST00000468499 745 ntTSL 328.75■■■□□ 2.199e-7■■□□□ 13.7
DROSHAQ9NRR4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.195e-16■■□□□ 13.7
DROSHAQ9NRR4 CMAS-203ENST00000535610 854 ntTSL 528.66■■■□□ 2.183e-18■■□□□ 13.7
DROSHAQ9NRR4 CTIF-206ENST00000588345 584 ntTSL 328.53■■■□□ 2.169e-7■■□□□ 13.7
DROSHAQ9NRR4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.14e-6■■□□□ 13.7
DROSHAQ9NRR4 COPS6-210ENST00000496358 610 ntTSL 228.05■■■□□ 2.089e-7■■□□□ 13.7
DROSHAQ9NRR4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC27.78■■■□□ 2.041e-8■■□□□ 13.7
DROSHAQ9NRR4 CTIF-209ENST00000591387 859 ntTSL 227.7■■■□□ 2.029e-7■■□□□ 13.7
DROSHAQ9NRR4 SPPL2B-210ENST00000614784 1411 ntTSL 1 (best)27.5■■□□□ 1.999e-7■■□□□ 13.7
DROSHAQ9NRR4 SRI-205ENST00000457606 769 ntTSL 527.48■■□□□ 1.991e-8■■□□□ 13.7
DROSHAQ9NRR4 POLR2E-209ENST00000591767 1214 ntTSL 227.47■■□□□ 1.991e-6■■□□□ 13.7
Retrieved 100 of 16,331 protein–RNA pairs in 99.3 ms