Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 AC104819.1-201ENST00000504587 486 ntBASIC19.9■□□□□ 0.78
TLR9Q9NR96 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 AC010240.3-201ENST00000607688 395 ntBASIC19.9■□□□□ 0.78
TLR9Q9NR96 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
TLR9Q9NR96 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
TLR9Q9NR96 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
TLR9Q9NR96 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TLR9Q9NR96 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TLR9Q9NR96 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
TLR9Q9NR96 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TLR9Q9NR96 AL022342.1-201ENST00000400363 863 ntBASIC19.89■□□□□ 0.77
TLR9Q9NR96 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.89■□□□□ 0.77
TLR9Q9NR96 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.89■□□□□ 0.77
TLR9Q9NR96 RCC2P3-201ENST00000418112 1537 ntBASIC19.89■□□□□ 0.77
TLR9Q9NR96 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.89■□□□□ 0.77
TLR9Q9NR96 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.89■□□□□ 0.77
TLR9Q9NR96 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TLR9Q9NR96 AC104390.1-201ENST00000555663 520 ntBASIC19.89■□□□□ 0.77
TLR9Q9NR96 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
TLR9Q9NR96 AC090616.6-201ENST00000582640 721 ntBASIC19.89■□□□□ 0.77
TLR9Q9NR96 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.89■□□□□ 0.77
TLR9Q9NR96 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.89■□□□□ 0.77
TLR9Q9NR96 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TLR9Q9NR96 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TLR9Q9NR96 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TLR9Q9NR96 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 HOXB1-202ENST00000577092 1414 ntBASIC19.88■□□□□ 0.77
TLR9Q9NR96 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 AC005332.3-201ENST00000589904 676 ntBASIC19.88■□□□□ 0.77
TLR9Q9NR96 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.88■□□□□ 0.77
TLR9Q9NR96 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TLR9Q9NR96 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
TLR9Q9NR96 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TLR9Q9NR96 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.87■□□□□ 0.77
TLR9Q9NR96 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TLR9Q9NR96 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.87■□□□□ 0.77
TLR9Q9NR96 AC008556.1-201ENST00000610908 2040 ntBASIC19.87■□□□□ 0.77
TLR9Q9NR96 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TLR9Q9NR96 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TLR9Q9NR96 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TLR9Q9NR96 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.87■□□□□ 0.77
TLR9Q9NR96 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TLR9Q9NR96 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TLR9Q9NR96 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms