Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 KRT8P26-201ENST00000534154 1276 ntBASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 KRT8P3-201ENST00000519669 1449 ntBASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 SLC25A24-204ENST00000569674 2357 ntBASIC21.02■□□□□ 0.96
PDLIM7Q9NR12 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PDLIM7Q9NR12 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
PDLIM7Q9NR12 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PDLIM7Q9NR12 KRT18P1-202ENST00000452408 1331 ntBASIC21.02■□□□□ 0.95
PDLIM7Q9NR12 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 CHCHD2P8-201ENST00000429873 447 ntBASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.01■□□□□ 0.95
PDLIM7Q9NR12 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21■□□□□ 0.95
PDLIM7Q9NR12 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM7Q9NR12 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM7Q9NR12 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM7Q9NR12 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM7Q9NR12 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM7Q9NR12 FP475955.4-201ENST00000623131 1990 ntBASIC21■□□□□ 0.95
PDLIM7Q9NR12 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM7Q9NR12 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21■□□□□ 0.95
PDLIM7Q9NR12 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PDLIM7Q9NR12 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDLIM7Q9NR12 AC116562.4-201ENST00000641316 2276 ntBASIC21■□□□□ 0.95
PDLIM7Q9NR12 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM7Q9NR12 AL162741.1-201ENST00000565563 1558 ntBASIC21■□□□□ 0.95
PDLIM7Q9NR12 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21■□□□□ 0.95
PDLIM7Q9NR12 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM7Q9NR12 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM7Q9NR12 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms