Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRM3Q9HC36 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRM3Q9HC36 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRM3Q9HC36 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRM3Q9HC36 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRM3Q9HC36 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.8■□□□□ 0.6
MRM3Q9HC36 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRM3Q9HC36 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRM3Q9HC36 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRM3Q9HC36 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRM3Q9HC36 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRM3Q9HC36 AC126763.1-201ENST00000552015 2118 ntBASIC18.79■□□□□ 0.6
MRM3Q9HC36 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRM3Q9HC36 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRM3Q9HC36 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRM3Q9HC36 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRM3Q9HC36 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 REXO1L10P-201ENST00000615707 1290 ntBASIC18.79■□□□□ 0.6
MRM3Q9HC36 AC008622.2-201ENST00000617006 1229 ntBASIC18.79■□□□□ 0.6
MRM3Q9HC36 REXO1L12P-201ENST00000622156 912 ntBASIC18.79■□□□□ 0.6
MRM3Q9HC36 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRM3Q9HC36 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRM3Q9HC36 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
MRM3Q9HC36 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRM3Q9HC36 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.78■□□□□ 0.6
MRM3Q9HC36 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRM3Q9HC36 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRM3Q9HC36 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRM3Q9HC36 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRM3Q9HC36 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 AC097488.1-201ENST00000507834 756 ntBASIC18.78■□□□□ 0.6
MRM3Q9HC36 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 SLC25A1P4-201ENST00000567977 778 ntBASIC18.78■□□□□ 0.6
MRM3Q9HC36 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRM3Q9HC36 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MRM3Q9HC36 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MRM3Q9HC36 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRM3Q9HC36 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRM3Q9HC36 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRM3Q9HC36 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRM3Q9HC36 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MRM3Q9HC36 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.78■□□□□ 0.6
MRM3Q9HC36 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 AL162741.1-201ENST00000565563 1558 ntBASIC18.77■□□□□ 0.6
MRM3Q9HC36 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 AL499627.1-201ENST00000569373 2188 ntBASIC18.77■□□□□ 0.6
MRM3Q9HC36 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms