Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 HTR7P1-201ENST00000538670 1336 ntBASIC18.08■□□□□ 0.49
LRTM1Q9HBL6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 AL353708.3-201ENST00000610272 989 ntBASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LRTM1Q9HBL6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 AC073592.3-201ENST00000625118 1834 ntBASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 RPS2P4-201ENST00000476944 856 ntBASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 AC068587.9-201ENST00000641814 219 ntBASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 MTMR9LP-203ENST00000426597 1545 ntBASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRTM1Q9HBL6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 AL354751.1-201ENST00000412768 1863 ntBASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 KSR1P1-201ENST00000446298 240 ntBASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 AC128676.1-201ENST00000454392 318 ntBASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 KRT8P32-201ENST00000512863 1461 ntBASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 KRT8P3-201ENST00000519669 1449 ntBASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
LRTM1Q9HBL6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms