Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 AL031598.1-201ENST00000561511 1773 ntBASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 RCC2P3-201ENST00000418112 1537 ntBASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.98■□□□□ 0.31
PCNX3Q9H6A9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 AC117947.1-201ENST00000427448 529 ntBASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 MIR4674-201ENST00000582457 87 ntBASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 AL023973.1-201ENST00000624619 620 ntBASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 AC126763.1-201ENST00000552015 2118 ntBASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 AC141257.4-201ENST00000634557 245 ntBASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 AC136944.6-201ENST00000634818 245 ntBASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.97■□□□□ 0.31
PCNX3Q9H6A9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 NEFHP1-201ENST00000412845 2629 ntBASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 PKD1P6-201ENST00000343738 4769 ntBASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 AC093525.10-201ENST00000625130 1569 ntBASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 NEK4P2-201ENST00000580004 1012 ntBASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 MIR3180-5-201ENST00000583743 153 ntBASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.96■□□□□ 0.31
PCNX3Q9H6A9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCNX3Q9H6A9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.3
PCNX3Q9H6A9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCNX3Q9H6A9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCNX3Q9H6A9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCNX3Q9H6A9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.3
PCNX3Q9H6A9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
PCNX3Q9H6A9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.96■□□□□ 0.3
PCNX3Q9H6A9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCNX3Q9H6A9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.96■□□□□ 0.3
PCNX3Q9H6A9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCNX3Q9H6A9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNX3Q9H6A9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNX3Q9H6A9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms