Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.07■□□□□ 0.64
PHACTR1Q9C0D0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PHACTR1Q9C0D0 FZD10-202ENST00000539839 3282 ntBASIC19.07■□□□□ 0.64
PHACTR1Q9C0D0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHACTR1Q9C0D0 KRT8P11-201ENST00000409686 1436 ntBASIC19.07■□□□□ 0.64
PHACTR1Q9C0D0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHACTR1Q9C0D0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHACTR1Q9C0D0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 PCDHB18P-201ENST00000524813 2368 ntBASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 AC020763.4-201ENST00000623414 4170 ntBASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 MTDHP1-201ENST00000605323 784 ntBASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 AL445675.2-201ENST00000620291 557 ntBASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHACTR1Q9C0D0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 HLA-L-209ENST00000420110 1011 ntBASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 AL499627.1-201ENST00000569373 2188 ntBASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 AC008403.3-201ENST00000598924 454 ntBASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHACTR1Q9C0D0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms