Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 AL662844.1-201ENST00000546340 181 ntBASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 AC024563.2-201ENST00000603282 481 ntBASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 AC023511.2-201ENST00000618803 211 ntBASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 RN7SL606P-201ENST00000472779 293 ntBASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC24.34■■□□□ 1.49
PCDH11XQ9BZA7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
PCDH11XQ9BZA7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH11XQ9BZA7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PCDH11XQ9BZA7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH11XQ9BZA7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH11XQ9BZA7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH11XQ9BZA7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH11XQ9BZA7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH11XQ9BZA7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDH11XQ9BZA7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH11XQ9BZA7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 AKR1C7P-201ENST00000305623 895 ntBASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 GUSBP12-201ENST00000513727 720 ntBASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH11XQ9BZA7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 MRPL3P1-201ENST00000400109 1033 ntBASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 FICD-205ENST00000552758 603 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH11XQ9BZA7 KRT89P-201ENST00000620027 1478 ntBASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 AC124864.1-201ENST00000623408 392 ntBASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH11XQ9BZA7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms