Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 RNA5SP413-201ENST00000516373 109 ntBASIC11.19□□□□□ -0.62
LIMD2Q9BT23 UNC93B5-201ENST00000530315 699 ntBASIC11.19□□□□□ -0.62
LIMD2Q9BT23 AP003097.1-201ENST00000530657 1135 ntBASIC11.19□□□□□ -0.62
LIMD2Q9BT23 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 GAMT-205ENST00000640762 751 ntTSL 5 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 Z82202.1-201ENST00000623446 1880 ntBASIC11.19□□□□□ -0.62
LIMD2Q9BT23 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LIMD2Q9BT23 AC124283.5-201ENST00000624661 1809 ntBASIC11.19□□□□□ -0.62
LIMD2Q9BT23 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 ZNF815P-204ENST00000434898 1737 ntBASIC11.18□□□□□ -0.62
LIMD2Q9BT23 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 ANKRD18DP-204ENST00000455355 1975 ntBASIC11.18□□□□□ -0.62
LIMD2Q9BT23 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 GAS7-202ENST00000396115 929 ntTSL 5 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 APTR-205ENST00000447009 902 ntTSL 2 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 KRT18P16-201ENST00000510337 1294 ntBASIC11.18□□□□□ -0.62
LIMD2Q9BT23 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 AC098934.4-201ENST00000564127 592 ntBASIC11.18□□□□□ -0.62
LIMD2Q9BT23 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 AC104581.1-202ENST00000635932 2618 ntBASIC11.18□□□□□ -0.62
LIMD2Q9BT23 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC11.18□□□□□ -0.62
LIMD2Q9BT23 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms