Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 KRT8P3-201ENST00000519669 1449 ntBASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 AC233263.1-201ENST00000578059 224 ntBASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPPED1Q9BRF8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 AP003097.1-201ENST00000530657 1135 ntBASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CPPED1Q9BRF8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 PRSS44-201ENST00000515154 1146 ntBASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 AP000997.3-201ENST00000623333 2250 ntBASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms