Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VGLL1Q99990 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.25□□□□□ -0.13
VGLL1Q99990 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VGLL1Q99990 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.25□□□□□ -0.13
VGLL1Q99990 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VGLL1Q99990 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.25□□□□□ -0.13
VGLL1Q99990 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.25□□□□□ -0.13
VGLL1Q99990 AL138781.1-201ENST00000566567 1274 ntBASIC14.25□□□□□ -0.13
VGLL1Q99990 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.25□□□□□ -0.13
VGLL1Q99990 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.25□□□□□ -0.13
VGLL1Q99990 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
VGLL1Q99990 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.25□□□□□ -0.13
VGLL1Q99990 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.25□□□□□ -0.13
VGLL1Q99990 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VGLL1Q99990 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VGLL1Q99990 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VGLL1Q99990 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.24□□□□□ -0.13
VGLL1Q99990 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VGLL1Q99990 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
VGLL1Q99990 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.24□□□□□ -0.13
VGLL1Q99990 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
VGLL1Q99990 TSPY21P-201ENST00000433481 731 ntBASIC14.24□□□□□ -0.13
VGLL1Q99990 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.24□□□□□ -0.13
VGLL1Q99990 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.24□□□□□ -0.13
VGLL1Q99990 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.24□□□□□ -0.13
VGLL1Q99990 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.24□□□□□ -0.13
VGLL1Q99990 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.24□□□□□ -0.13
VGLL1Q99990 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.24□□□□□ -0.13
VGLL1Q99990 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.24□□□□□ -0.13
VGLL1Q99990 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.24□□□□□ -0.13
VGLL1Q99990 AC092666.2-201ENST00000613287 246 ntBASIC14.24□□□□□ -0.13
VGLL1Q99990 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VGLL1Q99990 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
VGLL1Q99990 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.24□□□□□ -0.13
VGLL1Q99990 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.24□□□□□ -0.13
VGLL1Q99990 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VGLL1Q99990 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.24□□□□□ -0.13
VGLL1Q99990 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.24□□□□□ -0.13
VGLL1Q99990 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VGLL1Q99990 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VGLL1Q99990 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
VGLL1Q99990 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
VGLL1Q99990 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.23□□□□□ -0.13
VGLL1Q99990 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms