Protein–RNA interactions for Protein: Q96RJ6

FERD3L, Fer3-like protein, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FERD3LQ96RJ6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 FAM210CP-201ENST00000445714 574 ntBASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 MCCD1P1-208ENST00000445732 328 ntBASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 RCC2P3-201ENST00000418112 1537 ntBASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FERD3LQ96RJ6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 RN7SL850P-201ENST00000579959 291 ntBASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 AC092865.7-201ENST00000641832 219 ntBASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FERD3LQ96RJ6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 TMPOP1-202ENST00000424642 1267 ntBASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
FERD3LQ96RJ6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 AC141257.4-201ENST00000634557 245 ntBASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 AC136944.6-201ENST00000634818 245 ntBASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 AC073508.3-201ENST00000619697 1419 ntBASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.3■□□□□ 0.52
FERD3LQ96RJ6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms