Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC036111.1-201ENST00000533973 1582 ntBASIC15.62■□□□□ 0.09
GAFA1Q96PS6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 AC211429.1-201ENST00000415277 523 ntBASIC15.61■□□□□ 0.09
GAFA1Q96PS6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 CR769767.2-201ENST00000622735 460 ntBASIC15.61■□□□□ 0.09
GAFA1Q96PS6 AC097493.4-201ENST00000641197 219 ntBASIC15.61■□□□□ 0.09
GAFA1Q96PS6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 Z98044.1-201ENST00000632503 1764 ntBASIC15.61■□□□□ 0.09
GAFA1Q96PS6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 AL357033.4-201ENST00000617703 1807 ntBASIC15.61■□□□□ 0.09
GAFA1Q96PS6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GAFA1Q96PS6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 ANO7L1-203ENST00000602586 1720 ntBASIC15.6■□□□□ 0.09
GAFA1Q96PS6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 AC004408.2-201ENST00000623613 2777 ntBASIC15.6■□□□□ 0.09
GAFA1Q96PS6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GAFA1Q96PS6 KRT8P45-201ENST00000414328 1447 ntBASIC15.6■□□□□ 0.09
GAFA1Q96PS6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 MIR564-202ENST00000385049 94 ntBASIC15.59■□□□□ 0.09
GAFA1Q96PS6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 SLC25A3P1-201ENST00000443844 931 ntBASIC15.59■□□□□ 0.09
GAFA1Q96PS6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.59■□□□□ 0.09
GAFA1Q96PS6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
GAFA1Q96PS6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
GAFA1Q96PS6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
GAFA1Q96PS6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
GAFA1Q96PS6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms