Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 LINC01711-201ENST00000598340 967 ntBASIC19.94■□□□□ 0.78
ZNF558Q96NG5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 AL390719.2-201ENST00000606993 987 ntBASIC19.93■□□□□ 0.78
ZNF558Q96NG5 IGHV3-41-201ENST00000613121 348 ntBASIC19.93■□□□□ 0.78
ZNF558Q96NG5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF558Q96NG5 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.92■□□□□ 0.78
ZNF558Q96NG5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 AC006333.2-201ENST00000607957 2099 ntBASIC19.92■□□□□ 0.78
ZNF558Q96NG5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 EMBP1-201ENST00000458200 901 ntBASIC19.92■□□□□ 0.78
ZNF558Q96NG5 AC104819.1-201ENST00000504587 486 ntBASIC19.92■□□□□ 0.78
ZNF558Q96NG5 FOSL1P1-201ENST00000511041 816 ntBASIC19.92■□□□□ 0.78
ZNF558Q96NG5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF558Q96NG5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 IRX1P1-201ENST00000438849 1838 ntBASIC19.91■□□□□ 0.78
ZNF558Q96NG5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 LINC01521-201ENST00000504184 1943 ntBASIC19.91■□□□□ 0.78
ZNF558Q96NG5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF558Q96NG5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 GPR32P1-201ENST00000601788 811 ntBASIC19.9■□□□□ 0.78
ZNF558Q96NG5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms