Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DDX11Q96FC9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DDX11Q96FC9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
DDX11Q96FC9 FAM207BP-201ENST00000447172 505 ntBASIC22.28■■□□□ 1.16
DDX11Q96FC9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.28■■□□□ 1.16
DDX11Q96FC9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX11Q96FC9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX11Q96FC9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
DDX11Q96FC9 FEM1AP3-201ENST00000403722 1741 ntBASIC22.28■■□□□ 1.16
DDX11Q96FC9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
DDX11Q96FC9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX11Q96FC9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX11Q96FC9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.28■■□□□ 1.16
DDX11Q96FC9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.28■■□□□ 1.16
DDX11Q96FC9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.28■■□□□ 1.16
DDX11Q96FC9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 INGX-201ENST00000359239 846 ntBASIC22.27■■□□□ 1.16
DDX11Q96FC9 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.27■■□□□ 1.16
DDX11Q96FC9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 NTF6B-201ENST00000591913 560 ntBASIC22.27■■□□□ 1.16
DDX11Q96FC9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
DDX11Q96FC9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX11Q96FC9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.27■■□□□ 1.15
DDX11Q96FC9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.27■■□□□ 1.15
DDX11Q96FC9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 MFAP1P1-201ENST00000442257 1255 ntBASIC22.26■■□□□ 1.15
DDX11Q96FC9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX11Q96FC9 KRT8P41-201ENST00000533985 1514 ntBASIC22.26■■□□□ 1.15
DDX11Q96FC9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
DDX11Q96FC9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX11Q96FC9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX11Q96FC9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX11Q96FC9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX11Q96FC9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
DDX11Q96FC9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
DDX11Q96FC9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
DDX11Q96FC9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX11Q96FC9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
DDX11Q96FC9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
DDX11Q96FC9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX11Q96FC9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX11Q96FC9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms