Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 MYC-208ENST00000641036 567 ntBASIC19.18■□□□□ 0.66
RTP4Q96DX8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTP4Q96DX8 RCC2P3-201ENST00000418112 1537 ntBASIC19.18■□□□□ 0.66
RTP4Q96DX8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTP4Q96DX8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTP4Q96DX8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 AC096733.2-201ENST00000609937 1394 ntBASIC19.18■□□□□ 0.66
RTP4Q96DX8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTP4Q96DX8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RTP4Q96DX8 AC112777.1-201ENST00000540175 1423 ntBASIC19.17■□□□□ 0.66
RTP4Q96DX8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.17■□□□□ 0.66
RTP4Q96DX8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.17■□□□□ 0.66
RTP4Q96DX8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RTP4Q96DX8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RTP4Q96DX8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 KRT17P2-201ENST00000300992 1314 ntBASIC19.17■□□□□ 0.66
RTP4Q96DX8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RTP4Q96DX8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTP4Q96DX8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTP4Q96DX8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTP4Q96DX8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTP4Q96DX8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTP4Q96DX8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTP4Q96DX8 KRT18P41-201ENST00000518924 1277 ntBASIC19.16■□□□□ 0.66
RTP4Q96DX8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 AL109659.2-201ENST00000606809 1674 ntBASIC19.16■□□□□ 0.66
RTP4Q96DX8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTP4Q96DX8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTP4Q96DX8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTP4Q96DX8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTP4Q96DX8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTP4Q96DX8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.16■□□□□ 0.66
RTP4Q96DX8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTP4Q96DX8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 AC211429.1-201ENST00000415277 523 ntBASIC19.15■□□□□ 0.66
RTP4Q96DX8 FAM197Y1-201ENST00000421178 764 ntBASIC19.15■□□□□ 0.66
RTP4Q96DX8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 AC116562.2-201ENST00000507042 360 ntBASIC19.15■□□□□ 0.66
RTP4Q96DX8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 CD177P1-201ENST00000606252 935 ntBASIC19.15■□□□□ 0.66
RTP4Q96DX8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.15■□□□□ 0.66
RTP4Q96DX8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTP4Q96DX8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTP4Q96DX8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTP4Q96DX8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.14■□□□□ 0.66
RTP4Q96DX8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.14■□□□□ 0.65
RTP4Q96DX8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.14■□□□□ 0.65
RTP4Q96DX8 ABALON-201ENST00000629058 1903 ntBASIC19.14■□□□□ 0.65
RTP4Q96DX8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTP4Q96DX8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTP4Q96DX8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTP4Q96DX8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RTP4Q96DX8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
RTP4Q96DX8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.14■□□□□ 0.65
RTP4Q96DX8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms