Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
RNF25Q96BH1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF25Q96BH1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF25Q96BH1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF25Q96BH1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF25Q96BH1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF25Q96BH1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF25Q96BH1 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF25Q96BH1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF25Q96BH1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF25Q96BH1 POU5F1P3-201ENST00000428824 1078 ntBASIC19.75■□□□□ 0.75
RNF25Q96BH1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RNF25Q96BH1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF25Q96BH1 RPS2P4-201ENST00000476944 856 ntBASIC19.75■□□□□ 0.75
RNF25Q96BH1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RNF25Q96BH1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF25Q96BH1 AL445675.2-201ENST00000620291 557 ntBASIC19.75■□□□□ 0.75
RNF25Q96BH1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF25Q96BH1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF25Q96BH1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF25Q96BH1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF25Q96BH1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF25Q96BH1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF25Q96BH1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF25Q96BH1 HTR7P1-201ENST00000538670 1336 ntBASIC19.75■□□□□ 0.75
RNF25Q96BH1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF25Q96BH1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF25Q96BH1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RNF25Q96BH1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 ANO7L1-203ENST00000602586 1720 ntBASIC19.74■□□□□ 0.75
RNF25Q96BH1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RNF25Q96BH1 AL354751.1-201ENST00000412768 1863 ntBASIC19.74■□□□□ 0.75
RNF25Q96BH1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF25Q96BH1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF25Q96BH1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF25Q96BH1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF25Q96BH1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RNF25Q96BH1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF25Q96BH1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 PCDHB18P-201ENST00000524813 2368 ntBASIC19.74■□□□□ 0.75
RNF25Q96BH1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RNF25Q96BH1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
RNF25Q96BH1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF25Q96BH1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF25Q96BH1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RNF25Q96BH1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF25Q96BH1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF25Q96BH1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RNF25Q96BH1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF25Q96BH1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF25Q96BH1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RNF25Q96BH1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 NIFKP9-201ENST00000419265 221 ntBASIC19.73■□□□□ 0.75
RNF25Q96BH1 AC004980.1-204ENST00000429707 299 ntBASIC19.73■□□□□ 0.75
RNF25Q96BH1 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 AC091917.2-201ENST00000505002 744 ntBASIC19.73■□□□□ 0.75
RNF25Q96BH1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF25Q96BH1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.73■□□□□ 0.75
RNF25Q96BH1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF25Q96BH1 AC131212.4-201ENST00000623606 975 ntBASIC19.73■□□□□ 0.75
RNF25Q96BH1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF25Q96BH1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF25Q96BH1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF25Q96BH1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF25Q96BH1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF25Q96BH1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF25Q96BH1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF25Q96BH1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF25Q96BH1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms