Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ZNF428Q96B54 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZNF428Q96B54 AL138781.2-201ENST00000617896 1843 ntBASIC24.13■■□□□ 1.45
ZNF428Q96B54 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZNF428Q96B54 MCCD1P1-208ENST00000445732 328 ntBASIC24.13■■□□□ 1.45
ZNF428Q96B54 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.13■■□□□ 1.45
ZNF428Q96B54 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.13■■□□□ 1.45
ZNF428Q96B54 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.13■■□□□ 1.45
ZNF428Q96B54 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.13■■□□□ 1.45
ZNF428Q96B54 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZNF428Q96B54 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
ZNF428Q96B54 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC24.13■■□□□ 1.45
ZNF428Q96B54 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC24.13■■□□□ 1.45
ZNF428Q96B54 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZNF428Q96B54 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
ZNF428Q96B54 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
ZNF428Q96B54 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZNF428Q96B54 AC093503.3-201ENST00000624917 2352 ntBASIC24.13■■□□□ 1.45
ZNF428Q96B54 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF428Q96B54 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF428Q96B54 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF428Q96B54 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
ZNF428Q96B54 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF428Q96B54 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF428Q96B54 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF428Q96B54 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF428Q96B54 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC24.12■■□□□ 1.45
ZNF428Q96B54 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24.12■■□□□ 1.45
ZNF428Q96B54 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.12■■□□□ 1.45
ZNF428Q96B54 AC063952.2-201ENST00000498792 1227 ntBASIC24.12■■□□□ 1.45
ZNF428Q96B54 KRT18P41-201ENST00000518924 1277 ntBASIC24.12■■□□□ 1.45
ZNF428Q96B54 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF428Q96B54 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC24.12■■□□□ 1.45
ZNF428Q96B54 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC24.12■■□□□ 1.45
ZNF428Q96B54 CBFB-203ENST00000561924 584 ntTSL 5 BASIC24.12■■□□□ 1.45
ZNF428Q96B54 AL441883.1-201ENST00000566170 1045 ntBASIC24.12■■□□□ 1.45
ZNF428Q96B54 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF428Q96B54 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF428Q96B54 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC24.12■■□□□ 1.45
ZNF428Q96B54 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
ZNF428Q96B54 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
ZNF428Q96B54 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF428Q96B54 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF428Q96B54 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC24.12■■□□□ 1.45
ZNF428Q96B54 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZNF428Q96B54 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC24.11■■□□□ 1.45
ZNF428Q96B54 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
ZNF428Q96B54 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZNF428Q96B54 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ZNF428Q96B54 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZNF428Q96B54 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ZNF428Q96B54 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC24.11■■□□□ 1.45
ZNF428Q96B54 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC24.11■■□□□ 1.45
ZNF428Q96B54 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ZNF428Q96B54 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZNF428Q96B54 AL359075.1-203ENST00000462729 1002 ntBASIC24.11■■□□□ 1.45
ZNF428Q96B54 MIR4674-201ENST00000582457 87 ntBASIC24.11■■□□□ 1.45
ZNF428Q96B54 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.11■■□□□ 1.45
ZNF428Q96B54 AL358472.4-201ENST00000633140 710 ntBASIC24.11■■□□□ 1.45
ZNF428Q96B54 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC24.11■■□□□ 1.45
ZNF428Q96B54 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC24.11■■□□□ 1.45
ZNF428Q96B54 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
ZNF428Q96B54 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF428Q96B54 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC24.1■■□□□ 1.45
ZNF428Q96B54 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
ZNF428Q96B54 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF428Q96B54 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
ZNF428Q96B54 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF428Q96B54 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.1■■□□□ 1.45
ZNF428Q96B54 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.1■■□□□ 1.45
ZNF428Q96B54 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF428Q96B54 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF428Q96B54 SNAI3-AS1-205ENST00000568633 2096 ntBASIC24.1■■□□□ 1.45
ZNF428Q96B54 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF428Q96B54 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF428Q96B54 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
ZNF428Q96B54 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF428Q96B54 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC24.09■■□□□ 1.45
ZNF428Q96B54 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF428Q96B54 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.09■■□□□ 1.45
ZNF428Q96B54 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC24.09■■□□□ 1.45
ZNF428Q96B54 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC24.09■■□□□ 1.45
ZNF428Q96B54 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF428Q96B54 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF428Q96B54 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF428Q96B54 ENSA-205ENST00000361532 792 ntTSL 2 BASIC24.09■■□□□ 1.45
ZNF428Q96B54 MIR564-202ENST00000385049 94 ntBASIC24.09■■□□□ 1.45
ZNF428Q96B54 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC24.09■■□□□ 1.45
ZNF428Q96B54 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24.09■■□□□ 1.45
ZNF428Q96B54 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.09■■□□□ 1.45
ZNF428Q96B54 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.09■■□□□ 1.45
ZNF428Q96B54 MIR3180-5-201ENST00000583743 153 ntBASIC24.09■■□□□ 1.45
ZNF428Q96B54 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
ZNF428Q96B54 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF428Q96B54 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF428Q96B54 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF428Q96B54 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
ZNF428Q96B54 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
ZNF428Q96B54 AC008556.1-201ENST00000610908 2040 ntBASIC24.08■■□□□ 1.45
ZNF428Q96B54 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms