Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
USP9XQ93008 POM121L3P-201ENST00000419331 1163 ntBASIC16.34■□□□□ 0.21
USP9XQ93008 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.34■□□□□ 0.21
USP9XQ93008 RNA5SP415-201ENST00000517246 115 ntBASIC16.34■□□□□ 0.21
USP9XQ93008 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP9XQ93008 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP9XQ93008 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP9XQ93008 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
USP9XQ93008 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP9XQ93008 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP9XQ93008 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP9XQ93008 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.34■□□□□ 0.21
USP9XQ93008 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP9XQ93008 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP9XQ93008 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
USP9XQ93008 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.33■□□□□ 0.21
USP9XQ93008 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
USP9XQ93008 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.33■□□□□ 0.21
USP9XQ93008 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.33■□□□□ 0.21
USP9XQ93008 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.33■□□□□ 0.21
USP9XQ93008 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.33■□□□□ 0.21
USP9XQ93008 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
USP9XQ93008 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.33■□□□□ 0.21
USP9XQ93008 KRT8P3-201ENST00000519669 1449 ntBASIC16.33■□□□□ 0.21
USP9XQ93008 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
USP9XQ93008 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
USP9XQ93008 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
USP9XQ93008 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
USP9XQ93008 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
USP9XQ93008 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP9XQ93008 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP9XQ93008 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP9XQ93008 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.33■□□□□ 0.2
USP9XQ93008 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.33■□□□□ 0.2
USP9XQ93008 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
USP9XQ93008 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP9XQ93008 HLA-J-201ENST00000462773 1622 ntBASIC16.33■□□□□ 0.2
USP9XQ93008 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP9XQ93008 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.33■□□□□ 0.2
USP9XQ93008 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP9XQ93008 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP9XQ93008 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
USP9XQ93008 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.33■□□□□ 0.2
USP9XQ93008 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP9XQ93008 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
USP9XQ93008 FGFR3P6-201ENST00000457012 610 ntBASIC16.33■□□□□ 0.2
USP9XQ93008 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.33■□□□□ 0.2
USP9XQ93008 AP005212.1-201ENST00000581547 1997 ntBASIC16.32■□□□□ 0.2
USP9XQ93008 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
USP9XQ93008 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.32■□□□□ 0.2
USP9XQ93008 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
USP9XQ93008 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.32■□□□□ 0.2
USP9XQ93008 AC007274.1-201ENST00000439805 662 ntBASIC16.32■□□□□ 0.2
USP9XQ93008 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.32■□□□□ 0.2
USP9XQ93008 AC112482.1-201ENST00000492080 688 ntBASIC16.32■□□□□ 0.2
USP9XQ93008 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.32■□□□□ 0.2
USP9XQ93008 AC011840.4-201ENST00000578471 627 ntBASIC16.32■□□□□ 0.2
USP9XQ93008 AL596442.2-201ENST00000610240 980 ntBASIC16.32■□□□□ 0.2
USP9XQ93008 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.32■□□□□ 0.2
USP9XQ93008 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
USP9XQ93008 KRT18P28-201ENST00000453838 1332 ntBASIC16.32■□□□□ 0.2
USP9XQ93008 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
USP9XQ93008 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 AC133561.1-201ENST00000568600 2415 ntBASIC16.32■□□□□ 0.2
USP9XQ93008 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
USP9XQ93008 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.32■□□□□ 0.2
USP9XQ93008 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.32■□□□□ 0.2
USP9XQ93008 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP9XQ93008 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.32■□□□□ 0.2
USP9XQ93008 AC005336.2-201ENST00000593183 939 ntBASIC16.32■□□□□ 0.2
USP9XQ93008 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.32■□□□□ 0.2
USP9XQ93008 AP001269.4-201ENST00000609611 512 ntBASIC16.32■□□□□ 0.2
USP9XQ93008 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.31■□□□□ 0.2
USP9XQ93008 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
USP9XQ93008 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
USP9XQ93008 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.31■□□□□ 0.2
USP9XQ93008 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.31■□□□□ 0.2
USP9XQ93008 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.31■□□□□ 0.2
USP9XQ93008 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms