Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 MTDHP1-201ENST00000605323 784 ntBASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.52■□□□□ 0.24
RAB40AQ8WXH6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.52■□□□□ 0.23
RAB40AQ8WXH6 HTR7P1-202ENST00000624664 4411 ntBASIC16.52■□□□□ 0.23
RAB40AQ8WXH6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB40AQ8WXH6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.52■□□□□ 0.23
RAB40AQ8WXH6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB40AQ8WXH6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB40AQ8WXH6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAB40AQ8WXH6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB40AQ8WXH6 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.52■□□□□ 0.23
RAB40AQ8WXH6 TFP1-202ENST00000475455 1573 ntBASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 PRKY-204ENST00000533551 1019 ntBASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 AL162741.1-201ENST00000565563 1558 ntBASIC16.51■□□□□ 0.23
RAB40AQ8WXH6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms