Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC068880.1-201ENST00000507289 2297 ntBASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 FEM1AP3-201ENST00000403722 1741 ntBASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 ANO7L1-203ENST00000602586 1720 ntBASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 AC233263.1-201ENST00000578059 224 ntBASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 MTDHP1-201ENST00000605323 784 ntBASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RTN4IP1Q8WWV3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 KRT18P16-201ENST00000510337 1294 ntBASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 MIR4651-201ENST00000582622 73 ntBASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 AC006058.3-201ENST00000606217 1069 ntBASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTN4IP1Q8WWV3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 NBPF21P-201ENST00000425093 1451 ntBASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTN4IP1Q8WWV3 KRT8P8-201ENST00000434750 1448 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms