Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 AL512625.2-201ENST00000417533 625 ntBASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 AC093787.1-201ENST00000450396 207 ntBASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 RPS2P52-201ENST00000469610 820 ntBASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 AC005181.1-201ENST00000604782 1256 ntBASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 AC080080.1-201ENST00000625121 2420 ntBASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CKAP2Q8WWK9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CKAP2Q8WWK9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
CKAP2Q8WWK9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.64■□□□□ 0.58
CKAP2Q8WWK9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 AC106820.2-201ENST00000563775 3264 ntBASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 LSM12P1-201ENST00000411836 588 ntBASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 TSPY23P-201ENST00000440136 739 ntBASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 AC011767.1-201ENST00000617410 1153 ntBASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 RCC2P6-201ENST00000526625 1557 ntBASIC18.64■□□□□ 0.57
CKAP2Q8WWK9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms