Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 AC068338.2-201ENST00000563278 1430 ntBASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 AC080080.1-201ENST00000625121 2420 ntBASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 AC084018.2-201ENST00000613093 2607 ntBASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SMIM4Q8WVI0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 TSPY21P-201ENST00000433481 731 ntBASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 AC142381.2-201ENST00000566120 298 ntBASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.06■□□□□ 0.16
SMIM4Q8WVI0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 TNRC18P3-201ENST00000441896 2691 ntBASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM4Q8WVI0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 AC108860.2-201ENST00000562760 2183 ntBASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 AC069236.1-201ENST00000604339 616 ntBASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 MYC-208ENST00000641036 567 ntBASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.04■□□□□ 0.16
SMIM4Q8WVI0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms