Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RCC2P3-201ENST00000418112 1537 ntBASIC19.14■□□□□ 0.66
SHROOM3Q8TF72 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHROOM3Q8TF72 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHROOM3Q8TF72 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 AC128688.1-201ENST00000487626 519 ntBASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 AC126763.1-201ENST00000552015 2118 ntBASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM3Q8TF72 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 AL121894.2-201ENST00000602977 491 ntBASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 NEFHP1-201ENST00000412845 2629 ntBASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 AC009947.2-201ENST00000444014 672 ntBASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.13■□□□□ 0.65
SHROOM3Q8TF72 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 MMP23A-201ENST00000234610 1017 ntBASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 INGX-201ENST00000359239 846 ntBASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 AC104581.1-202ENST00000635932 2618 ntBASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 CCR12P-201ENST00000446203 998 ntBASIC19.12■□□□□ 0.65
SHROOM3Q8TF72 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 AL023803.3-201ENST00000615559 522 ntBASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms