Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.86■■□□□ 1.25
SNED1Q8TER0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.86■■□□□ 1.25
SNED1Q8TER0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SNED1Q8TER0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
SNED1Q8TER0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
SNED1Q8TER0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
SNED1Q8TER0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.86■■□□□ 1.25
SNED1Q8TER0 AC079776.4-201ENST00000511039 504 ntBASIC22.86■■□□□ 1.25
SNED1Q8TER0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
SNED1Q8TER0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SNED1Q8TER0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
SNED1Q8TER0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SNED1Q8TER0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.85■■□□□ 1.25
SNED1Q8TER0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SNED1Q8TER0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SNED1Q8TER0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SNED1Q8TER0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SNED1Q8TER0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SNED1Q8TER0 MIR574-201ENST00000385209 96 ntBASIC22.85■■□□□ 1.25
SNED1Q8TER0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC22.85■■□□□ 1.25
SNED1Q8TER0 PMS2P1-201ENST00000431037 1228 ntBASIC22.85■■□□□ 1.25
SNED1Q8TER0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
SNED1Q8TER0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.85■■□□□ 1.25
SNED1Q8TER0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC22.85■■□□□ 1.25
SNED1Q8TER0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.85■■□□□ 1.25
SNED1Q8TER0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SNED1Q8TER0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SNED1Q8TER0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.85■■□□□ 1.25
SNED1Q8TER0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.85■■□□□ 1.25
SNED1Q8TER0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SNED1Q8TER0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SNED1Q8TER0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNED1Q8TER0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SNED1Q8TER0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SNED1Q8TER0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNED1Q8TER0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNED1Q8TER0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC22.84■■□□□ 1.25
SNED1Q8TER0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC22.84■■□□□ 1.25
SNED1Q8TER0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
SNED1Q8TER0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
SNED1Q8TER0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC22.84■■□□□ 1.25
SNED1Q8TER0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SNED1Q8TER0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
SNED1Q8TER0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNED1Q8TER0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.84■■□□□ 1.25
SNED1Q8TER0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNED1Q8TER0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.84■■□□□ 1.25
SNED1Q8TER0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNED1Q8TER0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
SNED1Q8TER0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.84■■□□□ 1.25
SNED1Q8TER0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNED1Q8TER0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SNED1Q8TER0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SNED1Q8TER0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SNED1Q8TER0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SNED1Q8TER0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SNED1Q8TER0 EMD-201ENST00000369835 966 ntTSL 3 BASIC22.83■■□□□ 1.25
SNED1Q8TER0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
SNED1Q8TER0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC22.83■■□□□ 1.25
SNED1Q8TER0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC22.83■■□□□ 1.25
SNED1Q8TER0 MIR3180-4-201ENST00000582223 153 ntBASIC22.83■■□□□ 1.25
SNED1Q8TER0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SNED1Q8TER0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC22.83■■□□□ 1.25
SNED1Q8TER0 IL9RP2-201ENST00000423948 1312 ntBASIC22.83■■□□□ 1.25
SNED1Q8TER0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
SNED1Q8TER0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SNED1Q8TER0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.83■■□□□ 1.25
SNED1Q8TER0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
SNED1Q8TER0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
SNED1Q8TER0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.83■■□□□ 1.24
SNED1Q8TER0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
SNED1Q8TER0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNED1Q8TER0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 AL590627.1-203ENST00000421194 1026 ntBASIC22.82■■□□□ 1.24
SNED1Q8TER0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 LINC01711-201ENST00000598340 967 ntBASIC22.82■■□□□ 1.24
SNED1Q8TER0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SNED1Q8TER0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNED1Q8TER0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNED1Q8TER0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNED1Q8TER0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNED1Q8TER0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNED1Q8TER0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SNED1Q8TER0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNED1Q8TER0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNED1Q8TER0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNED1Q8TER0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNED1Q8TER0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.82■■□□□ 1.24
SNED1Q8TER0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms