Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 AL356441.2-201ENST00000443009 864 ntBASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 AC023632.3-201ENST00000521633 145 ntBASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 AL591742.1-201ENST00000604433 565 ntBASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 MIR6084-201ENST00000622012 110 ntBASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 AL645608.8-201ENST00000606034 2086 ntBASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM11BQ8TCY0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 AP001330.3-201ENST00000520123 633 ntBASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM11BQ8TCY0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM11BQ8TCY0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMIM11BQ8TCY0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SMIM11BQ8TCY0 AC135776.1-201ENST00000319817 2481 ntBASIC12.2□□□□□ -0.46
SMIM11BQ8TCY0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SMIM11BQ8TCY0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.2□□□□□ -0.46
SMIM11BQ8TCY0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
SMIM11BQ8TCY0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SMIM11BQ8TCY0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMIM11BQ8TCY0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMIM11BQ8TCY0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
SMIM11BQ8TCY0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
SMIM11BQ8TCY0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SMIM11BQ8TCY0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms